SCOP 1.65: Domain d2bpgb4: 2bpg B:149-335

Lineage for d2bpgb4 (2bpg B:149-335)

1. Root: SCOP 1.65

2. Class d: Alpha and beta proteins (a+b) [53931] (234 folds)

3. Fold d.218: Nucleotidyltransferase [81302] (1 superfamily)
   core: alpha-beta-turn-beta-X-beta-(alpha); mixed beta-sheet, order of core strands: 123

4. Superfamily d.218.1: Nucleotidyltransferase [81301] (4 families)

5. Family d.218.1.2: DNA polymerase beta-like [81300] (3 proteins)
   insert X in the core is an alpha-beta(2) unit; mixed 5-stranded sheet, order: 12543; contains extra C-terminal alpha+beta subdomain

6. Protein DNA polymerase beta, catalytic (31 kD) fragment [81578] (2 species)

7. Species Rat (Rattus norvegicus) [TaxId:10116] [81576] (17 PDB entries)

8. Domain d2bpgb4: 2bpg B:149-335 [75996]
   Other proteins in same PDB: d2bpga1, d2bpga3, d2bpgb1, d2bpgb3
   protein/DNA complex; complexed with dct, mg

Details for d2bpgb4

PDB Entry: 2bpg, 3.6 Å

PDB Description: structures of ternary complexes of rat dna polymerase beta, a dna template-primer, and ddctp

SCOP Domain Sequences for d2bpgb4:

Sequence, based on SEQRES records:

>d2bpgb4 d.218.1.2 (B:149-335) DNA polymerase beta, catalytic (31 kD) fragment {Rat (Rattus norvegicus)}
ripreemlqmqdivlnevkkldpeyiatvcgsfrrgaessgdmdvllthpnftsesskqp
kllhrvveqlqkvrfitdtlskgetkfmgvcqlpsendeneyphrridirlipkdqyycg
vlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdseqdifdyiqwryr
epkdrse

Sequence, based on observed residues (ATOM records):

>d2bpgb4 d.218.1.2 (B:149-335) DNA polymerase beta, catalytic (31 kD) fragment {Rat (Rattus norvegicus)}
ripreemlqmqdivlnevkkldpeyiatvcgsfrrgaessgdmdvllthpnftsesskqp
kllhrvveqlqkvrfitdtlskgetkfmgvcqlpseneyphrridirlipkdqyycgvly
ftgsdifnknmrahalekgftineytirplgvtgvageplpvdseqdifdyiqwryrepk
drse

Timeline for d2bpgb4:

• d2bpgb4 first appeared in SCOP 1.63
  
• d2bpgb4 appears in SCOP 1.67
  
• d2bpgb4 appears in the current release, SCOPe 2.08