Lineage for d2bpc_2 (2bpc 149-335)

  1. Root: SCOP 1.67
  2. 405194Class d: Alpha and beta proteins (a+b) [53931] (260 folds)
  3. 422922Fold d.218: Nucleotidyltransferase [81302] (1 superfamily)
    core: alpha-beta-turn-beta-X-beta-(alpha); mixed beta-sheet, order of core strands: 123
  4. 422923Superfamily d.218.1: Nucleotidyltransferase [81301] (8 families) (S)
  5. 422931Family d.218.1.2: DNA polymerase beta-like [81300] (4 proteins)
    insert X in the core is an alpha-beta(2) unit; mixed 5-stranded sheet, order: 12543; contains extra C-terminal alpha+beta subdomain
  6. 422932Protein DNA polymerase beta, catalytic (31 kD) fragment [81578] (2 species)
  7. 423026Species Rat (Rattus norvegicus) [TaxId:10116] [81576] (17 PDB entries)
  8. 423039Domain d2bpc_2: 2bpc 149-335 [75990]
    Other proteins in same PDB: d2bpc_1
    complexed with mn

Details for d2bpc_2

PDB Entry: 2bpc (more details), 2.8 Å

PDB Description: crystal structure of rat dna polymerase beta: evidence for a common polymerase mechanism

SCOP Domain Sequences for d2bpc_2:

Sequence, based on SEQRES records: (download)

>d2bpc_2 d.218.1.2 (149-335) DNA polymerase beta, catalytic (31 kD) fragment {Rat (Rattus norvegicus)}
ripreemlqmqdivlnevkkldpeyiatvcgsfrrgaessgdmdvllthpnftsesskqp
kllhrvveqlqkvrfitdtlskgetkfmgvcqlpsendeneyphrridirlipkdqyycg
vlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdseqdifdyiqwryr
epkdrse

Sequence, based on observed residues (ATOM records): (download)

>d2bpc_2 d.218.1.2 (149-335) DNA polymerase beta, catalytic (31 kD) fragment {Rat (Rattus norvegicus)}
ripreemlqmqdivlnevkkldpeyiatvcgsfrrgaessgdmdvllthpnftsesskqp
kllhrvveqlqkvrfitdtlskgetkfmgvcqlpseneyphrridirlipkdqyycgvly
ftgsdifnknmrahalekgftineytirplgvtgvageplpvdseqdifdyiqwryrepk
drse

SCOP Domain Coordinates for d2bpc_2:

Click to download the PDB-style file with coordinates for d2bpc_2.
(The format of our PDB-style files is described here.)

Timeline for d2bpc_2:

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Domains from same chain:
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d2bpc_1