Lineage for d1zqv_2 (1zqv 149-335)

  1. Root: SCOP 1.71
  2. 595667Class d: Alpha and beta proteins (a+b) [53931] (286 folds)
  3. 616179Fold d.218: Nucleotidyltransferase [81302] (1 superfamily)
    core: alpha-beta-turn-beta-X-beta-(alpha); mixed beta-sheet, order of core strands: 123
  4. 616180Superfamily d.218.1: Nucleotidyltransferase [81301] (9 families) (S)
  5. 616188Family d.218.1.2: DNA polymerase beta-like [81300] (4 proteins)
    insert X in the core is an alpha-beta(2) unit; mixed 5-stranded sheet, order: 12543; contains extra C-terminal alpha+beta subdomain
  6. 616189Protein DNA polymerase beta, catalytic (31 kD) fragment [81578] (2 species)
  7. 616285Species Rat (Rattus norvegicus) [TaxId:10116] [81576] (17 PDB entries)
  8. 616300Domain d1zqv_2: 1zqv 149-335 [75978]
    Other proteins in same PDB: d1zqv_1
    complexed with ca

Details for d1zqv_2

PDB Entry: 1zqv (more details), 2.7 Å

PDB Description: dna polymerase beta (pol b) (e.c.2.7.7.7), 31-kd domain; soaked in the presence of cacl2 (150 millimolar)

SCOP Domain Sequences for d1zqv_2:

Sequence, based on SEQRES records: (download)

>d1zqv_2 d.218.1.2 (149-335) DNA polymerase beta, catalytic (31 kD) fragment {Rat (Rattus norvegicus)}
ripreemlqmqdivlnevkkldpeyiatvcgsfrrgaessgdmdvllthpnftsesskqp
kllhrvveqlqkvrfitdtlskgetkfmgvcqlpsendeneyphrridirlipkdqyycg
vlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdseqdifdyiqwryr
epkdrse

Sequence, based on observed residues (ATOM records): (download)

>d1zqv_2 d.218.1.2 (149-335) DNA polymerase beta, catalytic (31 kD) fragment {Rat (Rattus norvegicus)}
ripreemlqmqdivlnevkkldpeyiatvcgsfrrgaessgdmdvllthpnftsesskqp
kllhrvveqlqkvrfitdtlskgetkfmgvcqlpseneyphrridirlipkdqyycgvly
ftgsdifnknmrahalekgftineytirplgvtgvageplpvdseqdifdyiqwryrepk
drse

SCOP Domain Coordinates for d1zqv_2:

Click to download the PDB-style file with coordinates for d1zqv_2.
(The format of our PDB-style files is described here.)

Timeline for d1zqv_2:

View in 3D
Domains from same chain:
(mouse over for more information)
d1zqv_1