Lineage for Protein: Oxalate decarboxylase OxdC (YvrK)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2814470Fold b.82: Double-stranded beta-helix [51181] (7 superfamilies)
    one turn of helix is made by two pairs of antiparallel strands linked with short turns
    has appearance of a sandwich of distinct architecture and jelly-roll topology
  4. 2814471Superfamily b.82.1: RmlC-like cupins [51182] (25 families) (S)
  5. 2814551Family b.82.1.2: Germin/Seed storage 7S protein [51187] (5 proteins)
    has additional insertions and/or extensions that are not grouped together
  6. 2814569Protein Oxalate decarboxylase OxdC (YvrK) [75033] (1 species)
    duplication: consists of two germin-like metal-ion binding domains

Species:

  • 2814570Bacillus subtilis [TaxId:1423] [75034] (4 PDB entries)
    1. Domain for 1j58:
      • 2814571Domain d1j58a_: 1j58 A: [71531]
        complexed with fmt, mg, mn
        multiple common domains: applies to families that are inconsistently divided into domains
        has additional insertions and/or extensions that are not grouped together
    2. Domain for 1l3j:
      • 2814572Domain d1l3ja_: 1l3j A: [73538]
        complexed with fmt, mg, mn
        multiple common domains: applies to families that are inconsistently divided into domains
        has additional insertions and/or extensions that are not grouped together
    3. Domain for 1uw8:
      • 2814573Domain d1uw8a_: 1uw8 A: [100100]
        complexed with mn, trs
        multiple common domains: applies to families that are inconsistently divided into domains
        has additional insertions and/or extensions that are not grouped together
    4. Domain for 3s0m:
      • 2814574Domain d3s0ma_: 3s0m A: [195530]
        automated match to d1uw8a_
        complexed with co3, edo, mn, peg

        multiple common domains: applies to families that are inconsistently divided into domains
        has additional insertions and/or extensions that are not grouped together

More info for Protein Oxalate decarboxylase OxdC (YvrK) from b.82.1.2: Germin/Seed storage 7S protein

Timeline for Protein Oxalate decarboxylase OxdC (YvrK) from b.82.1.2: Germin/Seed storage 7S protein: