SCOPe 2.07: Protein: Initiation factor eIF2 gamma subunit, domain II

Lineage for Protein: Initiation factor eIF2 gamma subunit, domain II

Root: SCOPe 2.07
Class b: All beta proteins [48724] (178 folds)
Fold b.43: Reductase/isomerase/elongation factor common domain [50412] (4 superfamilies)
barrel, closed; n=6, S=10; greek-key
Superfamily b.43.3: Translation proteins [50447] (7 families)
Family b.43.3.1: Elongation factors [50448] (11 proteins)
Protein Initiation factor eIF2 gamma subunit, domain II [74962] (3 species)

Species:

Methanococcus jannaschii [TaxId:2190] [101788] (1 PDB entry)
- Domain for 1s0u:
  - Domain d1s0ua1: 1s0u A:230-347 [98302]
    Other proteins in same PDB: d1s0ua2, d1s0ua3, d1s0ua4
    structural genomics
    complexed with zn
Pyrococcus abyssi [TaxId:29292] [74963] (5 PDB entries)
1. Domain for 1kjz:
  - Domain d1kjza1: 1kjz A:201-321 [72628]
    Other proteins in same PDB: d1kjza2, d1kjza3
    complexed with zn; mutant
2. Domain for 1kk0:
  - Domain d1kk0a1: 1kk0 A:201-321 [72631]
    Other proteins in same PDB: d1kk0a2, d1kk0a3
    complexed with zn
3. Domain for 1kk1:
  - Domain d1kk1a1: 1kk1 A:201-321 [72634]
    Other proteins in same PDB: d1kk1a2, d1kk1a3
    complexed with gnp, mg, zn; mutant
4. Domain for 1kk2:
  - Domain d1kk2a1: 1kk2 A:201-321 [72637]
    Other proteins in same PDB: d1kk2a2, d1kk2a3
    complexed with gdp, mg, zn; mutant
5. Domain for 1kk3:
  - Domain d1kk3a1: 1kk3 A:201-321 [72640]
    Other proteins in same PDB: d1kk3a2, d1kk3a3
    complexed with gdp, mg, zn

Sulfolobus solfataricus [TaxId:2287] [141335] (10 PDB entries)
Uniprot Q980A5 207-320

Domain for 2aho:
- Domain d2ahoa1: 2aho A:207-320 [126767]
  Other proteins in same PDB: d2ahoa2, d2ahoa3, d2ahob1, d2ahob2, d2ahob3
  complexed with gnp, mg, zn
Domain for 2plf:
- Domain d2plfa1: 2plf A:207-320 [149625]
  Other proteins in same PDB: d2plfa2, d2plfa3
  automated match to d2ahoa1
Domains for 2pmd:
1. Domain d2pmda1: 2pmd A:207-320 [149663]
  Other proteins in same PDB: d2pmda2, d2pmda3, d2pmdb2, d2pmdb3
  automated match to d2qn6a1
  complexed with gdp, gnp, ppv
2. Domain d2pmdb1: 2pmd B:207-320 [149666]
  Other proteins in same PDB: d2pmda2, d2pmda3, d2pmdb2, d2pmdb3
  automated match to d2qn6a1
  complexed with gdp, gnp, ppv
Domain for 2qmu:
- Domain d2qmua1: 2qmu A:207-320 [150894]
  Other proteins in same PDB: d2qmua2, d2qmua3, d2qmub1, d2qmub2
  automatically matched to d2ahoa1
  complexed with gdp, po4, zn
Domain for 2qn6:
- Domain d2qn6a1: 2qn6 A:207-320 [150911]
  Other proteins in same PDB: d2qn6a2, d2qn6a3, d2qn6b_
  automated match to d2ahoa1
  complexed with gdp, mg
Domains for 3i1f:
1. Domain d3i1fa2: 3i1f A:207-320 [246641]
  Other proteins in same PDB: d3i1fa1, d3i1fa3, d3i1fb1, d3i1fb3
  automated match to d2qn6a1
  protein/RNA complex; complexed with gcp, po4
2. Domain d3i1fb2: 3i1f B:207-320 [246644]
  Other proteins in same PDB: d3i1fa1, d3i1fa3, d3i1fb1, d3i1fb3
  automated match to d2qn6a1
  protein/RNA complex; complexed with gcp, po4

Domains for 4m0l:

Domain d4m0la2: 4m0l A:207-320 [253709]
Other proteins in same PDB: d4m0la1, d4m0la3, d4m0lb1, d4m0lb3, d4m0lc1, d4m0lc3, d4m0ld1, d4m0ld3, d4m0le1, d4m0le3, d4m0lf1, d4m0lf3
automated match to d2qn6a1
protein/RNA complex; complexed with gdp, mg, po4

Domain d4m0lb2: 4m0l B:207-320 [253712]
Other proteins in same PDB: d4m0la1, d4m0la3, d4m0lb1, d4m0lb3, d4m0lc1, d4m0lc3, d4m0ld1, d4m0ld3, d4m0le1, d4m0le3, d4m0lf1, d4m0lf3
automated match to d2qn6a1
protein/RNA complex; complexed with gdp, mg, po4

Domain d4m0lc2: 4m0l C:207-320 [253715]
Other proteins in same PDB: d4m0la1, d4m0la3, d4m0lb1, d4m0lb3, d4m0lc1, d4m0lc3, d4m0ld1, d4m0ld3, d4m0le1, d4m0le3, d4m0lf1, d4m0lf3
automated match to d2qn6a1
protein/RNA complex; complexed with gdp, mg, po4

Domain d4m0ld2: 4m0l D:207-320 [253718]
Other proteins in same PDB: d4m0la1, d4m0la3, d4m0lb1, d4m0lb3, d4m0lc1, d4m0lc3, d4m0ld1, d4m0ld3, d4m0le1, d4m0le3, d4m0lf1, d4m0lf3
automated match to d2qn6a1
protein/RNA complex; complexed with gdp, mg, po4

Domain d4m0le2: 4m0l E:207-320 [253721]
Other proteins in same PDB: d4m0la1, d4m0la3, d4m0lb1, d4m0lb3, d4m0lc1, d4m0lc3, d4m0ld1, d4m0ld3, d4m0le1, d4m0le3, d4m0lf1, d4m0lf3
automated match to d2qn6a1
protein/RNA complex; complexed with gdp, mg, po4

Domain d4m0lf2: 4m0l F:207-320 [253724]
Other proteins in same PDB: d4m0la1, d4m0la3, d4m0lb1, d4m0lb3, d4m0lc1, d4m0lc3, d4m0ld1, d4m0ld3, d4m0le1, d4m0le3, d4m0lf1, d4m0lf3
automated match to d2qn6a1
protein/RNA complex; complexed with gdp, mg, po4

Domain for 4m2l:
- Domain d4m2la2: 4m2l A:207-320 [253736]
  Other proteins in same PDB: d4m2la1, d4m2la3
  automated match to d2qn6a1
  complexed with edo, po4, so4
Domain for 4m4s:
- Domain d4m4sa2: 4m4s A:207-320 [253747]
  Other proteins in same PDB: d4m4sa1, d4m4sa3
  automated match to d2qn6a1
  protein/RNA complex; complexed with fmt, gdp, mg, na
Domain for 4m53:
- Domain d4m53a2: 4m53 A:207-320 [253750]
  Other proteins in same PDB: d4m53a1, d4m53a3
  automated match to d2qn6a1
  protein/RNA complex; complexed with bme, fmt, gcp, mg, na

More info for Protein Initiation factor eIF2 gamma subunit, domain II from b.43.3.1: Elongation factors

Timeline for Protein Initiation factor eIF2 gamma subunit, domain II from b.43.3.1: Elongation factors:

Protein Initiation factor eIF2 gamma subunit, domain II from b.43.3.1: Elongation factors first appeared in SCOP 1.61
Protein Initiation factor eIF2 gamma subunit, domain II from b.43.3.1: Elongation factors appears in SCOPe 2.06
Protein Initiation factor eIF2 gamma subunit, domain II from b.43.3.1: Elongation factors appears in the current release, SCOPe 2.08