SCOPe 2.08: Domain d1m6ba1: 1m6b A:8-165

Lineage for d1m6ba1 (1m6b A:8-165)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.10: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) [52046] (3 superfamilies)
   2 curved layers, a/b; parallel beta-sheet; order 1234...N; there are sequence similarities between different superfamilies

4. Superfamily c.10.2: L domain-like [52058] (9 families)
   less regular structure consisting of variable repeats

5. Family c.10.2.5: L domain [52071] (6 proteins)
   this is a repeat family; one repeat unit is 1n8z C:42-66 found in domain

6. Protein Receptor protein-tyrosine kinase Erbb-3 extracellular domain [75145] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [75146] (1 PDB entry)

8. Domain d1m6ba1: 1m6b A:8-165 [74521]
   Other proteins in same PDB: d1m6ba3, d1m6ba4, d1m6bb3, d1m6bb4
   L1 and L2 domains
   complexed with nag, so4

Details for d1m6ba1

PDB Entry: 1m6b, 2.6 Å

PDB Description: structure of the her3 (erbb3) extracellular domain

PDB Compounds: (A:) Receptor protein-tyrosine kinase erbB-3

SCOPe Domain Sequences for d1m6ba1:

Sequence, based on SEQRES records:

>d1m6ba1 c.10.2.5 (A:8-165) Receptor protein-tyrosine kinase Erbb-3 extracellular domain {Human (Homo sapiens) [TaxId: 9606]}
avcpgtlnglsvtgdaenqyqtlyklyercevvmgnleivltghnadlsflqwvrevtgy
vlvamnefstlplpnlrvvrgtqvydgkfaifvmlnyntnsshalrqlrltqlteilsgg
vyiekndklchmdtidwrdivrdrdaeivvkdngrscp

Sequence, based on observed residues (ATOM records):

>d1m6ba1 c.10.2.5 (A:8-165) Receptor protein-tyrosine kinase Erbb-3 extracellular domain {Human (Homo sapiens) [TaxId: 9606]}
avcprcevvmgnleivltghnadlsflqwvrevtgyvlvamnefstlplpnlrvvrgtqv
ydgkfaifvmlnyntnsshalrqlrltqlteilsggvyiekndklchmdtidwrdivrdr
daeivvkdngrscp

Timeline for d1m6ba1:

• d1m6ba1 first appeared in SCOP 1.61
  
• d1m6ba1 appears in SCOPe 2.07