SCOPe 2.08: Domain d1lwub1: 1lwu B:219-477

Lineage for d1lwub1 (1lwu B:219-477)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.171: Fibrinogen C-terminal domain-like [56495] (1 superfamily)
   unusual fold

4. Superfamily d.171.1: Fibrinogen C-terminal domain-like [56496] (2 families)

5. Family d.171.1.1: Fibrinogen C-terminal domain-like [56497] (2 proteins)
   automatically mapped to Pfam PF00147

6. Protein Fibrinogen C-terminal domains [56498] (7 species)

7. Species Sea lamprey (Petromyzon marinus), beta [TaxId:7757] [75588] (2 PDB entries)

8. Domain d1lwub1: 1lwu B:219-477 [74310]
   Other proteins in same PDB: d1lwua_, d1lwub2, d1lwuc2, d1lwud_, d1lwue2, d1lwuf2, d1lwug_, d1lwuh2, d1lwui2, d1lwuj_, d1lwuk2, d1lwul2
   complexed with bma, ca, gal, man, nag, ndg, nh2

Details for d1lwub1

PDB Entry: 1lwu, 2.8 Å

PDB Description: crystal structure of fragment d from lamprey fibrinogen complexed with the peptide gly-his-arg-pro-amide

PDB Compounds: (B:) fibrinogen beta chain

SCOPe Domain Sequences for d1lwub1:

Sequence; same for both SEQRES and ATOM records:

>d1lwub1 d.171.1.1 (B:219-477) Fibrinogen C-terminal domains {Sea lamprey (Petromyzon marinus), beta [TaxId: 7757]}
tvncrvpvvsgmhcediyrnggrtseayyiqpdlfsepykvfcdmeshgggwtvvqnrvd
gssnfardwntykaefgniafgngksicnipgeywlgtktvhqltkqhtqqvlfdmsdwe
gssvyaqyasfrpeneaqgyrlwvedysgnagnallegatqlmgdnrtmtihngmqfstf
drdndnwnpgdptkhcsredaggwwynrchaanpngryywggiytkeqadygtddgvvwm
nwkgswysmrqmamklrpk

Timeline for d1lwub1:

• d1lwub1 first appeared in SCOP 1.61
  
• d1lwub1 appears in SCOPe 2.07