SCOP 1.73: Domain d1lo4l1: 1lo4 L:1-112

Lineage for d1lo4l1 (1lo4 L:1-112)

1. Root: SCOP 1.73

2. Class b: All beta proteins [48724] (165 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (27 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (4 families)

5. Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (29 proteins)

6. Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
   VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species

7. Species Mouse (Mus musculus), cluster 1.1 [TaxId:10090] [88524] (127 PDB entries)

8. Domain d1lo4l1: 1lo4 L:1-112 [74141]
   Other proteins in same PDB: d1lo4h1, d1lo4h2, d1lo4l2
   part of retro Diels-Alder catalytic Fab 9D9

Details for d1lo4l1

PDB Entry: 1lo4, 2.4 Å

PDB Description: retro-diels-alderase catalytic antibody 9d9

PDB Compounds: (L:) If kappa light chain

SCOP Domain Sequences for d1lo4l1:

Sequence; same for both SEQRES and ATOM records:

>d1lo4l1 b.1.1.1 (L:1-112) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.1 [TaxId: 10090]}
dvlltqtplslpvslgdqasiscrssqtivhtngntyfewylqkpgqsphlliykvsnrl
sgvpdrfsgsgsgtdftlkisrveaedlglyycfqgshspwtfgggtklelk

Timeline for d1lo4l1:

• d1lo4l1 first appeared in SCOP 1.61
  
• d1lo4l1 appears in SCOP 1.71
  
• d1lo4l1 appears in SCOP 1.75
  
• d1lo4l1 appears in the current release, SCOPe 2.08