Lineage for d1l3lb2 (1l3l B:2-169)

  1. Root: SCOP 1.71
  2. 595667Class d: Alpha and beta proteins (a+b) [53931] (286 folds)
  3. 609436Fold d.110: Profilin-like [55769] (7 superfamilies)
    core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
  4. 609633Superfamily d.110.5: Pheromone-binding domain of LuxR-like quorum-sensing transcription factors [75516] (1 family) (S)
    alpha(2)-beta(2)-alpha(2)-beta(3)-alpha; possibly related to the PAS domain
  5. 609634Family d.110.5.1: Pheromone-binding domain of LuxR-like quorum-sensing transcription factors [75517] (1 protein)
  6. 609635Protein Transcription factor TraR, N-terminal domain [75518] (1 species)
  7. 609636Species Agrobacterium tumefaciens [TaxId:358] [75519] (2 PDB entries)
  8. 609638Domain d1l3lb2: 1l3l B:2-169 [73544]
    Other proteins in same PDB: d1l3la1, d1l3lb1, d1l3lc1, d1l3ld1

Details for d1l3lb2

PDB Entry: 1l3l (more details), 1.66 Å

PDB Description: crystal structure of a bacterial quorum-sensing transcription factor complexed with pheromone and dna

SCOP Domain Sequences for d1l3lb2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1l3lb2 d.110.5.1 (B:2-169) Transcription factor TraR, N-terminal domain {Agrobacterium tumefaciens}
qhwldkltdlaaiegdecilktgladiadhfgftgyaylhiqhrhitavtnyhrqwqsty
fdkkfealdpvvkrarsrkhiftwsgeherptlskderafydhasdfgirsgitipikta
ngfmsmftmasdkpvidldreidavaaaatigqiharisflrttptae

SCOP Domain Coordinates for d1l3lb2:

Click to download the PDB-style file with coordinates for d1l3lb2.
(The format of our PDB-style files is described here.)

Timeline for d1l3lb2: