Lineage for d1kg0c_ (1kg0 C:)

  1. Root: SCOPe 2.02
  2. 1190016Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1226319Fold d.169: C-type lectin-like [56435] (1 superfamily)
    unusual fold
  4. 1226320Superfamily d.169.1: C-type lectin-like [56436] (9 families) (S)
  5. 1226321Family d.169.1.1: C-type lectin domain [56437] (29 proteins)
    Pfam PF00059
  6. 1226374Protein EBV gp42 [75583] (1 species)
  7. 1226375Species Epstein-Barr virus [TaxId:10376] [75584] (1 PDB entry)
  8. 1226376Domain d1kg0c_: 1kg0 C: [72445]
    Other proteins in same PDB: d1kg0a1, d1kg0a2, d1kg0b1, d1kg0b2

Details for d1kg0c_

PDB Entry: 1kg0 (more details), 2.65 Å

PDB Description: structure of the epstein-barr virus gp42 protein bound to the mhc class ii receptor hla-dr1
PDB Compounds: (C:) gp42 Protein

SCOPe Domain Sequences for d1kg0c_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1kg0c_ d.169.1.1 (C:) EBV gp42 {Epstein-Barr virus [TaxId: 10376]}
htfqvpqnytkanctycntreytfsykgccfyftkkkhtwngcfqacaekypctyfygpt
pdilpvvtrnlnaieslwvgvyrvgegnwtsldggtfkvyqifgshctyvskfstvpvsh
hecsflkpclcvsqrs

SCOPe Domain Coordinates for d1kg0c_:

Click to download the PDB-style file with coordinates for d1kg0c_.
(The format of our PDB-style files is described here.)

Timeline for d1kg0c_: