SCOPe 2.08: Family d.198.1.1: Type III secretory system chaperone

Lineage for Family d.198.1.1: Type III secretory system chaperone

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.198: Secretion chaperone-like [69634] (5 superfamilies)
   alpha-beta(3)-alpha-beta(2)-alpha; 2 layers: alpha/beta

4. Superfamily d.198.1: Type III secretory system chaperone-like [69635] (3 families)

5. Family d.198.1.1: Type III secretory system chaperone [69636] (10 proteins)
   the family sequences are very divergent

Proteins:

1. AvrPphF ORF1, chaperone of AvrPphF ORF2 [110792] (1 species)

   • Species Pseudomonas syringae pv. phaseolicola [TaxId:319] [110793] (1 PDB entry)
     Uniprot Q9K2L2 1-125

2. Chaperone protein SycN [142904] (1 species)

   • Species Yersinia pestis [TaxId:632] [142905] (1 PDB entry)
     Uniprot P61380 2-122

3. Chaperone protein YscB [142902] (1 species)

   • Species Yersinia pestis [TaxId:632] [142903] (1 PDB entry)
     Uniprot Q56973 2-127

4. Putative YopH chaperone SycH [110790] (1 species)

   • Species Yersinia pestis [TaxId:632] [110791] (1 PDB entry)
     Uniprot Q7ARG9

5. Secretion chaperone CesT [69641] (1 species)

   • Species Escherichia coli [TaxId:562] [69642] (1 PDB entry)

6. Secretion chaperone SigE [69643] (1 species)

   • Species Salmonella enterica [TaxId:28901] [69644] (1 PDB entry)

7. Surface presentation of antigens protein SpaK (Spa15) [102748] (2 species)

   1. Species Salmonella typhimurium [TaxId:90371] [142901] (1 PDB entry)
      Uniprot P0A1N0 1-134

   2. Species Shigella flexneri [TaxId:623] [102749] (1 PDB entry)

8. Virulence effector SptP secretion chaperone SicP [69639] (1 species)

   • Species Salmonella typhimurium [TaxId:90371] [69640] (1 PDB entry)

9. YopE chaperone SycE [69637] (2 species)

   1. Species Yersinia enterocolitica [TaxId:630] [75351] (2 PDB entries)

   2. Species Yersinia pestis [TaxId:632] [69638] (3 PDB entries)

10. automated matches [227049] (3 species)
    not a true protein

    1. Species Escherichia coli [TaxId:562] [349001] (1 PDB entry)

    2. Species Escherichia coli [TaxId:574521] [354649] (1 PDB entry)

    3. Species Yersinia pestis [TaxId:632] [226625] (1 PDB entry)

More info for Family d.198.1.1: Type III secretory system chaperone

Timeline for Family d.198.1.1: Type III secretory system chaperone:

• Family d.198.1.1: Type III secretory system chaperone first appeared in SCOP 1.59
  
• Family d.198.1.1: Type III secretory system chaperone appears in SCOPe 2.07