Lineage for d1kfxl3 (1kfx L:2-355)

  1. Root: SCOP 1.73
  2. 713694Class d: Alpha and beta proteins (a+b) [53931] (334 folds)
  3. 715176Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 715177Superfamily d.3.1: Cysteine proteinases [54001] (16 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 715453Family d.3.1.3: Calpain large subunit, catalytic domain (domain II) [54040] (1 protein)
  6. 715454Protein Calpain large subunit, catalytic domain (domain II) [54041] (5 species)
    includes the N-terminal 'sequence' domain I
  7. 715457Species Human (Homo sapiens), M-type [TaxId:9606] [54042] (2 PDB entries)
  8. 715459Domain d1kfxl3: 1kfx L:2-355 [68577]
    Other proteins in same PDB: d1kfxl1, d1kfxl2, d1kfxs_

Details for d1kfxl3

PDB Entry: 1kfx (more details), 3.15 Å

PDB Description: Crystal Structure of Human m-Calpain Form I
PDB Compounds: (L:) m-calpain large subunit

SCOP Domain Sequences for d1kfxl3:

Sequence, based on SEQRES records: (download)

>d1kfxl3 d.3.1.3 (L:2-355) Calpain large subunit, catalytic domain (domain II) {Human (Homo sapiens), M-type [TaxId: 9606]}
agiaaklakdreaaeglgsheraikylnqdyealrnecleagtlfqdpsfpaipsalgfk
elgpyssktrgmrwkrpteicadpqfiiggatrtdicqgalgdcwllaaiasltlneeil
arvvplnqsfqenyagifhfqfwqygewvevvvddrlptkdgellfvhsaegsefwsall
ekayakingcyealsggattegfedftggiaewyelkkpppnlfkiiqkalqkgsllgcs
iditsaadseaitfqklvkghaysvtgaeevesngslqklirirnpwgevewtgrwndnc
pswntidpeererltrrhedgefwmsfsdflrhysrleicnltpdtltsdtykk

Sequence, based on observed residues (ATOM records): (download)

>d1kfxl3 d.3.1.3 (L:2-355) Calpain large subunit, catalytic domain (domain II) {Human (Homo sapiens), M-type [TaxId: 9606]}
agiaaklakdreaaeglgsheraikylnqdyealrnecleagtlfqdpsfpaipsalgfk
elgpyssktrgmrwkrpteicadpqfiiggatrtdicqgalgdcwllaaiasltlneeil
arvvplnqsfqenyagifhfqfwqygewvevvvddrlptkdgellfvhsaegsefwsall
ekayakingcyealsggattegfedftggiaewyelkkpppnlfkiiqkalqkgsllgcs
idkghaysvtgaeevesngslqklirirnpwgevewtgrwmsfsdflrhysrleicnltp
dtltsdtykk

SCOP Domain Coordinates for d1kfxl3:

Click to download the PDB-style file with coordinates for d1kfxl3.
(The format of our PDB-style files is described here.)

Timeline for d1kfxl3:

View in 3D
Domains from other chains:
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d1kfxs_