SCOPe 2.05: Domain d1jynd5: 1jyn D:334-625

Lineage for d1jynd5 (1jyn D:334-625)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.3: beta-glycanases [51487] (27 proteins)
   consist of a number of sequence families

6. Protein beta-Galactosidase, domain 3 [51510] (2 species)

7. Species Escherichia coli [TaxId:562] [51511] (42 PDB entries)
   Uniprot P00722

8. Domain d1jynd5: 1jyn D:334-625 [67482]
   Other proteins in same PDB: d1jyna1, d1jyna2, d1jyna3, d1jyna4, d1jynb1, d1jynb2, d1jynb3, d1jynb4, d1jync1, d1jync2, d1jync3, d1jync4, d1jynd1, d1jynd2, d1jynd3, d1jynd4
   complexed with dms, lat, mg, na

Details for d1jynd5

PDB Entry: 1jyn, 1.8 Å

PDB Description: e. coli (lacz) beta-galactosidase (e537q) in complex with lactose

PDB Compounds: (D:) beta-galactosidase

SCOPe Domain Sequences for d1jynd5:

Sequence; same for both SEQRES and ATOM records:

>d1jynd5 c.1.8.3 (D:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]}
evriengllllngkpllirgvnrhehhplhgqvmdeqtmvqdillmkqnnfnavrcshyp
nhplwytlcdryglyvvdeaniethgmvpmnrltddprwlpamservtrmvqrdrnhpsv
iiwslgnesghganhdalyrwiksvdpsrpvqyegggadttatdiicpmyarvdedqpfp
avpkwsikkwlslpgetrplilcqyahamgnslggfakywqafrqyprlqggfvwdwvdq
slikydengnpwsayggdfgdtpndrqfcmnglvfadrtphpalteakhqqq

Timeline for d1jynd5:

• d1jynd5 first appeared in SCOP 1.59
  
• d1jynd5 appears in SCOPe 2.04
  
• d1jynd5 appears in SCOPe 2.06
  
• d1jynd5 appears in the current release, SCOPe 2.08