SCOPe 2.05: Domain d1jqib2: 1jqi B:404-634

Lineage for d1jqib2 (1jqi B:404-634)

1. Root: SCOPe 2.05

2. Class e: Multi-domain proteins (alpha and beta) [56572] (68 folds)

3. Fold e.6: Acyl-CoA dehydrogenase NM domain-like [56644] (1 superfamily)
   2 domains: (1) all-alpha: 5 helices; (2) contains an open beta-sheet barrel: n*=5, S*=8; complex topology

4. Superfamily e.6.1: Acyl-CoA dehydrogenase NM domain-like [56645] (3 families)
   flavoprotein: binds FAD; constituent families differ in the numbers of C-terminal domains (four-helical bundles)

5. Family e.6.1.1: Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains [56646] (10 proteins)

6. Protein Butyryl-CoA dehydrogenase, NM domains [56647] (2 species)

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [69877] (1 PDB entry)

8. Domain d1jqib2: 1jqi B:404-634 [67090]
   Other proteins in same PDB: d1jqia1, d1jqib1
   complexed with caa, fad

Details for d1jqib2

PDB Entry: 1jqi, 2.25 Å

PDB Description: crystal structure of rat short chain acyl-coa dehydrogenase complexed with acetoacetyl-coa

PDB Compounds: (B:) short chain acyl-CoA dehydrogenase

SCOPe Domain Sequences for d1jqib2:

Sequence; same for both SEQRES and ATOM records:

>d1jqib2 e.6.1.1 (B:404-634) Butyryl-CoA dehydrogenase, NM domains {Norway rat (Rattus norvegicus) [TaxId: 10116]}
vyqsvelpethqmlrqtcrdfaekelvpiaaqldkehlfptsqvkkmgelgllamdvpee
lsgagldylaysialeeisrgcastgvimsvnnslylgpilkfgssqqkqqwitpftngd
kigcfalsepgngsdagaasttareegdswvlngtkawitnsweasatvvfastdrsrqn
kgisaflvpmptpgltlgkkedklgirasstanlifedcripkenllgepg

Timeline for d1jqib2:

• d1jqib2 first appeared in SCOP 1.59
  
• d1jqib2 appears in SCOPe 2.04
  
• d1jqib2 appears in SCOPe 2.06
  
• d1jqib2 appears in the current release, SCOPe 2.08