Lineage for d1jlga2 (1jlg A:2-429)

  1. Root: SCOP 1.75
  2. 883176Class e: Multi-domain proteins (alpha and beta) [56572] (66 folds)
  3. 884269Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
    divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
  4. 884270Superfamily e.8.1: DNA/RNA polymerases [56672] (6 families) (S)
    "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
  5. 884437Family e.8.1.2: Reverse transcriptase [56686] (2 proteins)
  6. 884438Protein HIV-1 reverse transcriptase [56689] (2 species)
  7. 884439Species Human immunodeficiency virus type 1 [TaxId:11676] [56690] (111 PDB entries)
    Uniprot P04585 159-692 # chain A coverage; chain B is shorter: 162-582
    Uniprot P03366 186-725 # chain A coverage; chain B coverage: 156-584
    Uniprot P04585 158-698 # chain A coverage; chain B is shorter: 159-595
    Uniprot P04585 159-692 # chain A coverage; chain B is shorter: 162-582 ! Uniprot P03366 186-725 # chain A coverage; chain B coverage: 156-584 ! Uniprot P04585 158-698 # chain A coverage; chain B is shorter: 159-595
  8. 884503Domain d1jlga2: 1jlg A:2-429 [66849]
    Other proteins in same PDB: d1jlga1
    complexed with uc1; mutant

Details for d1jlga2

PDB Entry: 1jlg (more details), 2.6 Å

PDB Description: crystal structure of y188c mutant hiv-1 reverse transcriptase in complex with uc-781
PDB Compounds: (A:) hiv-1 rt a-chain

SCOP Domain Sequences for d1jlga2:

Sequence, based on SEQRES records: (download)

>d1jlga2 e.8.1.2 (A:2-429) HIV-1 reverse transcriptase {Human immunodeficiency virus type 1 [TaxId: 11676]}
ispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvf
aikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpld
edfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviy
qymddlcvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtv
qpivlpekdswtvndiqklvgklnwasqiypgikvrqlckllrgtkalteviplteeael
elaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgah
tndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpp
lvklwyql

Sequence, based on observed residues (ATOM records): (download)

>d1jlga2 e.8.1.2 (A:2-429) HIV-1 reverse transcriptase {Human immunodeficiency virus type 1 [TaxId: 11676]}
ispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvf
aikkklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrkyt
aftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlc
vgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlpe
kdswtvndiqklvgklnwasqiypgikvrqlckllrgtkalteviplteeaelelaenre
ilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkql
teavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwyq
l

SCOP Domain Coordinates for d1jlga2:

Click to download the PDB-style file with coordinates for d1jlga2.
(The format of our PDB-style files is described here.)

Timeline for d1jlga2:

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Domains from same chain:
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d1jlga1
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Domains from other chains:
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d1jlgb_