SCOPe 2.06: Domain d1gv1d2: 1gv1 D:143-302

Lineage for d1gv1d2 (1gv1 D:143-302)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.162: LDH C-terminal domain-like [56326] (1 superfamily)
   unusual fold, defines family

4. Superfamily d.162.1: LDH C-terminal domain-like [56327] (3 families)

5. Family d.162.1.1: Lactate & malate dehydrogenases, C-terminal domain [56328] (5 proteins)
   N-terminal domain is NAD-binding module (alpha/beta Rossmann-fold domain)
   automatically mapped to Pfam PF02866

6. Protein Malate dehydrogenase [56329] (12 species)

7. Species Chlorobium vibrioforme [TaxId:1098] [69842] (2 PDB entries)

8. Domain d1gv1d2: 1gv1 D:143-302 [65605]
   Other proteins in same PDB: d1gv1a1, d1gv1b1, d1gv1c1, d1gv1d1

Details for d1gv1d2

PDB Entry: 1gv1, 2.5 Å

PDB Description: structural basis for thermophilic protein stability: structures of thermophilic and mesophilic malate dehydrogenases

PDB Compounds: (D:) malate dehydrogenase

SCOPe Domain Sequences for d1gv1d2:

Sequence; same for both SEQRES and ATOM records:

>d1gv1d2 d.162.1.1 (D:143-302) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}
agvldaarfrsfiamelgvsmqdinacvlgghgdamvpvvkyttvagipisdllpaetid
klvertrnggaeivehlkqgsafyapassvvemvesivldrkrvlpcavglegqygidkt
fvgvpvklgrngveqiyeinldqadldllqksakivdenc

Timeline for d1gv1d2:

• d1gv1d2 first appeared in SCOP 1.59
  
• d1gv1d2 appears in SCOPe 2.05
  
• d1gv1d2 appears in SCOPe 2.07
  
• d1gv1d2 appears in the current release, SCOPe 2.08