SCOPe 2.04: Domain d1gk8e1: 1gk8 E:150-475

Lineage for d1gk8e1 (1gk8 E:150-475)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.14: RuBisCo, C-terminal domain [51649] (2 families)
   automatically mapped to Pfam PF00016

5. Family c.1.14.1: RuBisCo, large subunit, C-terminal domain [51650] (2 proteins)
   N-terminal domain is alpha+beta

6. Protein Ribulose 1,5-bisphosphate carboxylase-oxygenase [51651] (12 species)

7. Species Green alga (Chlamydomonas reinhardtii) [TaxId:3055] [69403] (4 PDB entries)

8. Domain d1gk8e1: 1gk8 E:150-475 [65238]
   Other proteins in same PDB: d1gk8a2, d1gk8c2, d1gk8e2, d1gk8g2, d1gk8i_, d1gk8k_, d1gk8m_, d1gk8o_
   complexed with cap, edo, mg

Details for d1gk8e1

PDB Entry: 1gk8, 1.4 Å

PDB Description: rubisco from chlamydomonas reinhardtii

PDB Compounds: (E:) ribulose-1,5 bisphosphate carboxylase large chain

SCOPe Domain Sequences for d1gk8e1:

Sequence; same for both SEQRES and ATOM records:

>d1gk8e1 c.1.14.1 (E:150-475) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]}
gpphgiqverdklnkygrgllgctikpklglsaknygravyeclrggldftkddenvnsq
pfmrwrdrflfvaeaiykaqaetgevkghylnatagtceemmkravcakelgvpiimhdy
ltggftantslaiycrdnglllhihramhavidrqrnhgihfrvlakalrmsggdhlhsg
tvvgklegerevtlgfvdlmrddyvekdrsrgiyftqdwcsmpgvmpvasggihvwhmpa
lveifgddaclqfgggtlghpwgnapgaaanrvaleactqarnegrdlareggdvirsac
kwspelaaacevwkeikfefdtidkl

Timeline for d1gk8e1:

• d1gk8e1 first appeared in SCOP 1.59
  
• d1gk8e1 appears in SCOPe 2.03
  
• d1gk8e1 appears in SCOPe 2.05
  
• d1gk8e1 appears in the current release, SCOPe 2.08