Lineage for d1db7a1 (1db7 A:138-207)

  1. Root: SCOP 1.63
  2. 208553Class a: All alpha proteins [46456] (171 folds)
  3. 210246Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (11 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 210555Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (36 families) (S)
    contains a small beta-sheet (wing)
  5. 210591Family a.4.5.4: CAP C-terminal domain-like [46796] (2 proteins)
  6. 210592Protein Catabolite gene activator protein (CAP), C-terminal domain [46797] (1 species)
    N-terminal domain has double beta-helix fold
  7. 210593Species Escherichia coli [TaxId:562] [46798] (12 PDB entries)
  8. 210609Domain d1db7a1: 1db7 A:138-207 [64778]
    Other proteins in same PDB: d1db7a2
    complexed with cmp

Details for d1db7a1

PDB Entry: 1db7 (more details), 3 Å

PDB Description: protein-dna recognition and dna deformation revealed in crystal structures of cap-dna complexes

SCOP Domain Sequences for d1db7a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1db7a1 a.4.5.4 (A:138-207) Catabolite gene activator protein (CAP), C-terminal domain {Escherichia coli}
dvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcsretvgrilkmledqnlis
ahgktivvyg

SCOP Domain Coordinates for d1db7a1:

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Timeline for d1db7a1:

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Domains from same chain:
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d1db7a2