SCOP 1.59: Domain d1a8va2: 1a8v A:48-118

Lineage for d1a8va2 (1a8v A:48-118)

1. Root: SCOP 1.59

2. Class b: All beta proteins [48724] (110 folds)

3. Fold b.40: OB-fold [50198] (8 superfamilies)

4. Superfamily b.40.4: Nucleic acid-binding proteins [50249] (9 families)

5. Family b.40.4.5: Cold shock DNA-binding domain-like [50282] (13 proteins)

6. Protein Rho termination factor, RNA-binding domain [68910] (1 species)

7. Species Escherichia coli [TaxId:562] [68911] (4 PDB entries)

8. Domain d1a8va2: 1a8v A:48-118 [64713]
   Other proteins in same PDB: d1a8va1, d1a8vb1

Details for d1a8va2

PDB Entry: 1a8v, 2 Å

PDB Description: structure of the rna-binding domain of the rho transcription terminator

SCOP Domain Sequences for d1a8va2:

Sequence, based on SEQRES records:

>d1a8va2 b.40.4.5 (A:48-118) Rho termination factor, RNA-binding domain {Escherichia coli}
difgdgvleilqdgfgflrsadssylagpddiyvspsqirrfnlrtgdtisgkirppkeg
eryfallkvne

Sequence, based on observed residues (ATOM records):

>d1a8va2 b.40.4.5 (A:48-118) Rho termination factor, RNA-binding domain {Escherichia coli}
difgdgvleilqdgfgflrsaagpddiyvspsqirrfnlrtgdtisgkirppkegeryfa
llkvne

Timeline for d1a8va2:

• d1a8va2 is new in SCOP 1.59
  
• d1a8va2 appears in SCOP 1.61
  
• d1a8va2 appears in the current release, SCOPe 2.08