Lineage for Protein: ADP-ribose pyrophosphatase

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2971307Fold d.113: Nudix [55810] (1 superfamily)
    beta(2)-alpha-beta(3)-alpha; 3 layers: alpha/beta/alpha; mixed sheet
    contains beta-grasp motif
  4. 2971308Superfamily d.113.1: Nudix [55811] (8 families) (S)
  5. 2971309Family d.113.1.1: MutT-like [55812] (17 proteins)
  6. 2971452Protein ADP-ribose pyrophosphatase [64365] (4 species)

Species:

  1. 2971453Escherichia coli [TaxId:562] [64366] (5 PDB entries)
    1. Domains for 1g0s:
      1. 2971454Domain d1g0sa_: 1g0s A: [60187]
        CASP4
        has additional subdomain(s) that are not in the common domain
      2. 2971455Domain d1g0sb_: 1g0s B: [60188]
        CASP4
        has additional subdomain(s) that are not in the common domain
    2. Domains for 1g9q:
      1. 2971460Domain d1g9qa_: 1g9q A: [60401]
        complexed with apr
        has additional subdomain(s) that are not in the common domain
      2. 2971461Domain d1g9qb_: 1g9q B: [60402]
        complexed with apr
        has additional subdomain(s) that are not in the common domain
    3. Domains for 1ga7:
      1. 2971458Domain d1ga7a_: 1ga7 A: [60412]
        complexed with gd3
        has additional subdomain(s) that are not in the common domain
      2. 2971459Domain d1ga7b_: 1ga7 B: [60413]
        complexed with gd3
        has additional subdomain(s) that are not in the common domain
    4. Domains for 1khz:
      1. 2971456Domain d1khza_: 1khz A: [77414]
        complexed with adv, cl, mg
        has additional subdomain(s) that are not in the common domain
      2. 2971457Domain d1khzb_: 1khz B: [77415]
        complexed with adv, cl, mg
        has additional subdomain(s) that are not in the common domain
    5. Domains for 1viq:
      1. 2971462Domain d1viqa1: 1viq A:1-207 [100766]
        Other proteins in same PDB: d1viqa2, d1viqb2
        structural genomics
        has additional subdomain(s) that are not in the common domain
      2. 2971463Domain d1viqb1: 1viq B:1-207 [100767]
        Other proteins in same PDB: d1viqa2, d1viqb2
        structural genomics
        has additional subdomain(s) that are not in the common domain
      3. 2971464Domain d1viqc_: 1viq C: [100768]
        Other proteins in same PDB: d1viqa2, d1viqb2
        structural genomics
        has additional subdomain(s) that are not in the common domain
  2. 2971465Mycobacterium tuberculosis [TaxId:1773] [103200] (5 PDB entries)
    gene Rv1700
    1. Domain for 1mk1:
      • 2971467Domain d1mk1a_: 1mk1 A: [91306]
        complexed with apr
        has additional subdomain(s) that are not in the common domain
    2. Domain for 1mp2:
      • 2971469Domain d1mp2a_: 1mp2 A: [91383]
        has additional subdomain(s) that are not in the common domain
    3. Domain for 1mqe:
      • 2971466Domain d1mqea_: 1mqe A: [91394]
        complexed with apr, gd3
        has additional subdomain(s) that are not in the common domain
    4. Domain for 1mqw:
      • 2971468Domain d1mqwa_: 1mqw A: [91427]
        complexed with adv, mn
        has additional subdomain(s) that are not in the common domain
    5. Domain for 1mr2:
      • 2971470Domain d1mr2a_: 1mr2 A: [91428]
        complexed with a12, mn
        has additional subdomain(s) that are not in the common domain
  3. 2971471Thermus thermophilus [TaxId:274] [118083] (13 PDB entries)
    Uniprot Q84CU3
    1. Domain for 1v8i:
      • 2971476Domain d1v8ia_: 1v8i A: [113572]
        has additional subdomain(s) that are not in the common domain
    2. Domain for 1v8l:
      • 2971482Domain d1v8la_: 1v8l A: [113573]
        complexed with apr
        has additional subdomain(s) that are not in the common domain
    3. Domain for 1v8m:
      • 2971479Domain d1v8ma_: 1v8m A: [113574]
        complexed with apr, gd
        has additional subdomain(s) that are not in the common domain
    4. Domain for 1v8n:
      • 2971477Domain d1v8na_: 1v8n A: [113575]
        complexed with zn
        has additional subdomain(s) that are not in the common domain
    5. Domain for 1v8r:
      • 2971478Domain d1v8ra1: 1v8r A:11-169 [119872]
        complexed with apr, zn
        has additional subdomain(s) that are not in the common domain
    6. Domain for 1v8s:
      • 2971483Domain d1v8sa_: 1v8s A: [113576]
        complexed with amp, mg
        has additional subdomain(s) that are not in the common domain
    7. Domain for 1v8t:
      • 2971484Domain d1v8ta_: 1v8t A: [113577]
        complexed with r5p, zn
        has additional subdomain(s) that are not in the common domain
    8. Domain for 1v8u:
      • 2971480Domain d1v8ua_: 1v8u A: [113578]
        complexed with mg, so4; mutant
        has additional subdomain(s) that are not in the common domain
    9. Domain for 1v8v:
      • 2971481Domain d1v8va_: 1v8v A: [113579]
        complexed with apr, mg; mutant
        has additional subdomain(s) that are not in the common domain
    10. Domain for 1v8w:
      • 2971475Domain d1v8wa_: 1v8w A: [113580]
        complexed with so4, zn; mutant
        has additional subdomain(s) that are not in the common domain
    11. Domain for 1v8y:
      • 2971474Domain d1v8ya_: 1v8y A: [113581]
        complexed with apr, zn; mutant
        has additional subdomain(s) that are not in the common domain
    12. Domain for 3x0i:
      • 2971472Domain d3x0ia_: 3x0i A: [316341]
        automated match to d1v8ia_
        complexed with gol, so4

        has additional subdomain(s) that are not in the common domain
    13. Domain for 3x0j:
      • 2971473Domain d3x0ja_: 3x0j A: [316342]
        automated match to d1v8ia_
        complexed with gol, so4

        has additional subdomain(s) that are not in the common domain
  4. 2971485Thermus thermophilus [TaxId:300852] [316338] (9 PDB entries)
    1. Domain for 3x0k:
      • 2971486Domain d3x0ka_: 3x0k A: [316348]
        automated match to d1v8ia_
        complexed with ar6, gol

        has additional subdomain(s) that are not in the common domain
    2. Domain for 3x0l:
      • 2971487Domain d3x0la_: 3x0l A: [316389]
        automated match to d1v8ia_
        complexed with ar6

        has additional subdomain(s) that are not in the common domain
    3. Domain for 3x0m:
      • 2971493Domain d3x0ma_: 3x0m A: [316339]
        automated match to d1v8ia_
        complexed with ar6, gol, mn, so4

        has additional subdomain(s) that are not in the common domain
    4. Domain for 3x0n:
      • 2971490Domain d3x0na_: 3x0n A: [316347]
        automated match to d1v8ia_
        complexed with ar6, gol, mn, so4

        has additional subdomain(s) that are not in the common domain
    5. Domain for 3x0o:
      • 2971488Domain d3x0oa_: 3x0o A: [316340]
        automated match to d1v8ia_
        complexed with ar6, gol, mn, so4

        has additional subdomain(s) that are not in the common domain
    6. Domain for 3x0p:
      • 2971494Domain d3x0pa_: 3x0p A: [316375]
        automated match to d1v8ia_
        complexed with ar6, gol, mn, so4

        has additional subdomain(s) that are not in the common domain
    7. Domain for 3x0q:
      • 2971491Domain d3x0qa_: 3x0q A: [316354]
        automated match to d1v8ia_
        complexed with ar6, gol, mn, so4

        has additional subdomain(s) that are not in the common domain
    8. Domain for 3x0r:
      • 2971492Domain d3x0ra_: 3x0r A: [316355]
        automated match to d1v8ia_
        complexed with gol, mn, so4

        has additional subdomain(s) that are not in the common domain
    9. Domain for 3x0s:
      • 2971489Domain d3x0sa_: 3x0s A: [316401]
        automated match to d1v8ra1
        complexed with gol, mn, so4

        has additional subdomain(s) that are not in the common domain

More info for Protein ADP-ribose pyrophosphatase from d.113.1.1: MutT-like

Timeline for Protein ADP-ribose pyrophosphatase from d.113.1.1: MutT-like: