Lineage for Species: Escherichia coli

  1. Root: SCOP 1.67
  2. 383641Class c: Alpha and beta proteins (a/b) [51349] (130 folds)
  3. 400342Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest
  4. 400343Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (13 families) (S)
  5. 400568Family c.68.1.13: Cytidylytransferase [68901] (4 proteins)
  6. 400569Protein 4-diphosphocytidyl-2-c-methylerythritol (CDP-me) synthase (YgbP) [64140] (2 species)
  7. 400570Species Escherichia coli [TaxId:562] [64141] (6 PDB entries)

PDB entries in Species: Escherichia coli:

  1. Domain(s) for 1h3m:
    1. 400576Domain d1h3ma_: 1h3m A: [90600]
    2. 400577Domain d1h3mb_: 1h3m B: [90601]
      complexed with cl, n2p; mutant
  2. Domain(s) for 1i52:
  3. Domain(s) for 1ini:
  4. Domain(s) for 1inj:
  5. Domain(s) for 1vgt:
    1. 400573Domain d1vgta_: 1vgt A: [100604]
    2. 400574Domain d1vgtb_: 1vgt B: [100605]
      structural genomics
  6. Domain(s) for 1vgu:
    1. 400578Domain d1vgua_: 1vgu A: [100606]
    2. 400579Domain d1vgub_: 1vgu B: [100607]
      structural genomics

More info for Species Escherichia coli [TaxId:562] from c.68.1.13 4-diphosphocytidyl-2-c-methylerythritol (CDP-me) synthase (YgbP)

Timeline for Species Escherichia coli [TaxId:562] from c.68.1.13 4-diphosphocytidyl-2-c-methylerythritol (CDP-me) synthase (YgbP):

  • Species Escherichia coli [TaxId:562] from c.68.1.13 4-diphosphocytidyl-2-c-methylerythritol (CDP-me) synthase (YgbP) first appeared in SCOP 1.57, called Species Escherichia coli [TaxId:562] from c.68.1.11 4-diphosphocytidyl-2-c-methylerythritol (CDP-me) synthase (YgbP)
  • Species Escherichia coli [TaxId:562] from c.68.1.13 4-diphosphocytidyl-2-c-methylerythritol (CDP-me) synthase (YgbP) appears in SCOP 1.65
  • Species Escherichia coli [TaxId:562] from c.68.1.13 4-diphosphocytidyl-2-c-methylerythritol (CDP-me) synthase (YgbP) appears in SCOP 1.69
  • Species Escherichia coli [TaxId:562] from c.68.1.13 4-diphosphocytidyl-2-c-methylerythritol (CDP-me) synthase (YgbP) appears in the current release, SCOPe 2.08, called Species Escherichia coli [TaxId:562] from c.68.1.13 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP)