Species:

1. Escherichia coli [TaxId:562] [64141] (6 PDB entries)

   1. Domains for 1h3m:

      1. Domain d1h3ma_: 1h3m A: [90600] complexed with cl, n2p

      2. Domain d1h3mb_: 1h3m B: [90601] complexed with cl, n2p

   2. Domain for 1i52:

      • Domain d1i52a_: 1i52 A: [61767] complexed with ca, ctp, mg

   3. Domain for 1ini:

      • Domain d1inia_: 1ini A: [66219] complexed with cdm, mg

   4. Domain for 1inj:

      • Domain d1inja_: 1inj A: [62607] complexed with ca

   5. Domains for 1vgt:

      1. Domain d1vgta_: 1vgt A: [100604] structural genomics

      2. Domain d1vgtb_: 1vgt B: [100605] structural genomics

   6. Domains for 1vgu:

      1. Domain d1vgua_: 1vgu A: [100606] structural genomics

      2. Domain d1vgub_: 1vgu B: [100607] structural genomics

2. Neisseria gonorrhoeae [TaxId:485] [102605] (2 PDB entries)

   1. Domains for 1vgw:

      1. Domain d1vgwa_: 1vgw A: [100612] structural genomics

      2. Domain d1vgwb_: 1vgw B: [100613] structural genomics

      3. Domain d1vgwc_: 1vgw C: [100614] structural genomics

      4. Domain d1vgwd_: 1vgw D: [100615] structural genomics

      5. Domain d1vgwe_: 1vgw E: [100616] structural genomics

      6. Domain d1vgwf_: 1vgw F: [100617] structural genomics

   2. Domains for 1vgz:

      1. Domain d1vgza_: 1vgz A: [100624] structural genomics complexed with so4

      2. Domain d1vgzb_: 1vgz B: [100625] structural genomics complexed with so4

3. Thale cress (Arabidopsis thaliana), chloroplast [TaxId:3702] [142690] (12 PDB entries) Uniprot P69834 75-300

   1. Domain for 1w77:

      • Domain d1w77a1: 1w77 A:75-300 [120679] complexed with c5p, cd, cu

   2. Domain for 2yc3:

      • Domain d2yc3a1: 2yc3 A:76-300 [196204] Other proteins in same PDB: d2yc3a2 automated match to d1w77a1 complexed with cd, cu, mw5, na

   3. Domain for 2yc5:

      • Domain d2yc5a1: 2yc5 A:76-299 [207545] Other proteins in same PDB: d2yc5a2 automated match to d2yc3a_ complexed with 6bc, act, cd, cu, mg, na, zn

   4. Domain for 4nai:

      • Domain d4naia_: 4nai A: [236468] automated match to d1w77a1 complexed with cd, k

   5. Domain for 4nak:

      • Domain d4naka_: 4nak A: [236467] automated match to d2yc3a_ complexed with cd, dtt, k, pbq

   6. Domain for 4nal:

      • Domain d4nala1: 4nal A:76-300 [236465] Other proteins in same PDB: d4nala2 automated match to d2yc3a_ complexed with cd, dtt, h70, k

   7. Domain for 4nan:

      • Domain d4nana_: 4nan A: [236466] automated match to d2yc3a_ complexed with 2jm, cd, cl, dtt, k

   8. Domain for 5mrm:

      • Domain d5mrma1: 5mrm A:76-299 [336814] Other proteins in same PDB: d5mrma2 automated match to d1w77a1 complexed with act, cd, k, q9t, trs

   9. Domain for 5mrn:

      • Domain d5mrna_: 5mrn A: [336816] automated match to d1w77a1 complexed with cd, k; mutant

   10. Domain for 5mro:

       • Domain d5mroa_: 5mro A: [338597] automated match to d1w77a1 complexed with act, cd, k, q9p, trs; mutant

   11. Domain for 5mrp:

       • Domain d5mrpa_: 5mrp A: [336813] automated match to d1w77a1 complexed with 6bc, cd, k; mutant

   12. Domain for 5mrq:

       • Domain d5mrqa_: 5mrq A: [336831] automated match to d1w77a1 complexed with cd, trs; mutant

4. Thermotoga maritima [TaxId:2336] [117699] (1 PDB entry) Uniprot Q9X1B3

   • Domains for 1vpa:

     1. Domain d1vpaa1: 1vpa A:1-219 [113948] Other proteins in same PDB: d1vpaa2, d1vpab2 Structural genomics target complexed with acy, ctp, mg

     2. Domain d1vpab1: 1vpa B:1-218 [113949] Other proteins in same PDB: d1vpaa2, d1vpab2 Structural genomics target complexed with acy, ctp, mg

More info for Protein 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) from c.68.1.13: Cytidylytransferase

Timeline for Protein 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) from c.68.1.13: Cytidylytransferase:

• Protein 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) from c.68.1.13: Cytidylytransferase first appeared in SCOP 1.57, called Protein 4-diphosphocytidyl-2-c-methylerythritol (CDP-me) synthase (YgbP) from c.68.1.11: 4-diphosphocytidyl-2-c-methylerythritol (CDP-me) synthase (YgbP)
  
• Protein 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) from c.68.1.13: Cytidylytransferase appears in SCOPe 2.07