SCOP 1.69: Domain d1jdfd1: 1jdf D:138-446

Lineage for d1jdfd1 (1jdf D:138-446)

1. Root: SCOP 1.69

2. Class c: Alpha and beta proteins (a/b) [51349] (136 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (31 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.11: Enolase C-terminal domain-like [51604] (2 families)
   binds metal ion (magnesium or manganese) in conserved site inside barrel
   N-terminal alpha+beta domain is common to this family

5. Family c.1.11.2: D-glucarate dehydratase-like [51609] (9 proteins)

6. Protein D-glucarate dehydratase [51610] (2 species)

7. Species Escherichia coli [TaxId:562] [51612] (6 PDB entries)

8. Domain d1jdfd1: 1jdf D:138-446 [62903]
   Other proteins in same PDB: d1jdfa2, d1jdfb2, d1jdfc2, d1jdfd2

Details for d1jdfd1

PDB Entry: 1jdf, 2 Å

PDB Description: glucarate dehydratase from e.coli n341d mutant

SCOP Domain Sequences for d1jdfd1:

Sequence, based on SEQRES records:

>d1jdfd1 c.1.11.2 (D:138-446) D-glucarate dehydratase {Escherichia coli}
dgqqrsevemlgylffvgnrkatplpyqsqpddscdwyrlrheeamtpdavvrlaeaaye
kygfndfklkggvlageeeaesivalaqrfpqaritldpngawslneaikigkylkgsla
yaedpcgaeqgfsgrevmaefrratglptatnmiatdwrqmghtlslqsvdipladphfw
tmqgsvrvaqmchefgltwgshsdnhfdislamfthvaaaapgkitaidthwiwqegnqr
ltkepfeikgglvqvpekpglgveidmdqvmkahelyqkhglgarddamgmqylipgwtf
dnkrpcmvr

Sequence, based on observed residues (ATOM records):

>d1jdfd1 c.1.11.2 (D:138-446) D-glucarate dehydratase {Escherichia coli}
dgqqrsevemlgylffvgnrkatplpyqsqpddscdwyrlrheeamtpdavvrlaeaaye
kygfndfklkggvlagaeeaesivalaqrfpqaritldpngawslneaikigkylkgsla
yaedpcgaeqgfsgrevmaefrratglptatnmiatdwrqmghtlslqsvdipladphfw
tmqgsvrvaqmchefgltwgshsdnhfdislamfthvaaaapgaitaidthwiwqegnqr
ltkepfeikgglvqvpekpglgveidmdqvmkahalyqkhglgarddamgmqylipgwtf
dnkrpcmvr

Timeline for d1jdfd1:

• d1jdfd1 first appeared in SCOP 1.57
  
• d1jdfd1 appears in SCOP 1.67
  
• d1jdfd1 appears in SCOP 1.71
  
• d1jdfd1 appears in the current release, SCOPe 2.08