SCOPe 2.04: Domain d1jdfb1: 1jdf B:138-446

Lineage for d1jdfb1 (1jdf B:138-446)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.11: Enolase C-terminal domain-like [51604] (3 families)
   binds metal ion (magnesium or manganese) in conserved site inside barrel
   N-terminal alpha+beta domain is common to this superfamily

5. Family c.1.11.2: D-glucarate dehydratase-like [51609] (14 proteins)

6. Protein D-glucarate dehydratase [51610] (2 species)

7. Species Escherichia coli [TaxId:562] [51612] (7 PDB entries)

8. Domain d1jdfb1: 1jdf B:138-446 [62899]
   Other proteins in same PDB: d1jdfa2, d1jdfb2, d1jdfc2, d1jdfd2
   complexed with glr, ipa, mg; mutant

Details for d1jdfb1

PDB Entry: 1jdf, 2 Å

PDB Description: glucarate dehydratase from e.coli n341d mutant

PDB Compounds: (B:) glucarate dehydratase

SCOPe Domain Sequences for d1jdfb1:

Sequence; same for both SEQRES and ATOM records:

>d1jdfb1 c.1.11.2 (B:138-446) D-glucarate dehydratase {Escherichia coli [TaxId: 562]}
dgqqrsevemlgylffvgnrkatplpyqsqpddscdwyrlrheeamtpdavvrlaeaaye
kygfndfklkggvlageeeaesivalaqrfpqaritldpngawslneaikigkylkgsla
yaedpcgaeqgfsgrevmaefrratglptatnmiatdwrqmghtlslqsvdipladphfw
tmqgsvrvaqmchefgltwgshsdnhfdislamfthvaaaapgkitaidthwiwqegnqr
ltkepfeikgglvqvpekpglgveidmdqvmkahelyqkhglgarddamgmqylipgwtf
dnkrpcmvr

Timeline for d1jdfb1:

• d1jdfb1 first appeared in SCOP 1.57
  
• d1jdfb1 appears in SCOPe 2.03
  
• d1jdfb1 appears in SCOPe 2.05
  
• d1jdfb1 appears in the current release, SCOPe 2.08