Lineage for d1h6kc3 (1h6k C:481-790)

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2725421Fold a.118: alpha-alpha superhelix [48370] (28 superfamilies)
    multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
  4. 2725422Superfamily a.118.1: ARM repeat [48371] (28 families) (S)
  5. 2725861Family a.118.1.14: MIF4G domain-like [100908] (6 proteins)
    duplication: family members contains 2 or more structurally similar domains of this fold connected by unstructured linkers
    this is a repeat family; one repeat unit is 1hu3 A:905-942 found in domain
  6. 2725862Protein CBP80, 80KDa nuclear cap-binding protein [63606] (1 species)
    contains three domains of this fold connected with long linkers
  7. 2725863Species Human (Homo sapiens) [TaxId:9606] [63607] (6 PDB entries)
  8. 2725878Domain d1h6kc3: 1h6k C:481-790 [60683]
    Other proteins in same PDB: d1h6kx_, d1h6ky_, d1h6kz_
    protein/RNA complex
    applies to all domains of a family if the common domain is composed of a different number of small repeating units

Details for d1h6kc3

PDB Entry: 1h6k (more details), 2 Å

PDB Description: nuclear cap binding complex
PDB Compounds: (C:) cbp80

SCOPe Domain Sequences for d1h6kc3:

Sequence, based on SEQRES records: (download)

>d1h6kc3 a.118.1.14 (C:481-790) CBP80, 80KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
ptciykygdessnslpghsvalclavafkskatndeifsilkdvpnpnqdddddegfsfn
plkievfvqtllhlaaksfshsfsalakfhevfktlaesdegklhvlrvmfevwrnhpqm
iavlvdkmirtqivdcaavanwifsselsrdftrlfvweilhstirkmnkhvlkiqkele
eakeklarqhdgvleeqierlqekvesaqseqknlflvifqrfimiltehlvrcetdgts
vltpwykncierlqqiflqhhqiiqqymvtlenllftaeldphilavfqqfcalqa

Sequence, based on observed residues (ATOM records): (download)

>d1h6kc3 a.118.1.14 (C:481-790) CBP80, 80KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
ptciykygdessnslpghsvalclavafkskatndeifsilkdvpnpsfnplkievfvqt
llhlaaksfshsfsalakfhevfktlaesdegklhvlrvmfevwrnhpqmiavlvdkmir
tqivdcaavanwifsselsrdftrlfvweilhstirkmnkhvlkiqkeleeakekleeqi
erlqekvesaqseqknlflvifqrfimiltehlvrcetdgtsvltpwykncierlqqifl
qhhqiiqqymvtlenllftaeldphilavfqqfcalqa

SCOPe Domain Coordinates for d1h6kc3:

Click to download the PDB-style file with coordinates for d1h6kc3.
(The format of our PDB-style files is described here.)

Timeline for d1h6kc3: