Lineage for Protein: Retrovius gp41 protease-resistant core

  1. Root: SCOP 1.65
  2. 344849Class h: Coiled coil proteins [57942] (6 folds)
  3. 345566Fold h.3: Stalk segment of viral fusion proteins [58063] (2 superfamilies)
    core: trimeric coiled coil
  4. 345630Superfamily h.3.2: Virus ectodomain [58069] (1 family) (S)
  5. 345631Family h.3.2.1: Virus ectodomain [58070] (6 proteins)
  6. 345666Protein Retrovius gp41 protease-resistant core [58071] (3 species)
    coiled coil; biological unit: trimer

Species:

  1. 345667Human immunodeficiency virus type 1 [TaxId:11676] [58072] (16 PDB entries)
    1. Domain for 1aik:
    2. Domain for 1czq:
      • 345669Domain d1czqa_: 1czq A: [45720]
        fusion protein between gp41 and GCN4 fragments; complex with a d-peptide inhibitor of HIV-1 entry
    3. Domain for 1df4:
    4. Domain for 1df5:
    5. Domain for 1dlb:
    6. Domain for 1env:
    7. Domains for 1f23:
      1. 345679Domain d1f23a_: 1f23 A: [59602]
      2. 345680Domain d1f23b_: 1f23 B: [59603]
      3. 345681Domain d1f23c_: 1f23 C: [59604]
      4. 345682Domain d1f23d_: 1f23 D: [59605]
      5. 345683Domain d1f23e_: 1f23 E: [59606]
      6. 345684Domain d1f23f_: 1f23 F: [59607]
    8. Domain for 1fav:
      • 345689Domain d1fav.1: 1fav A:,C: [45728]
        fusion protein between gp41 and GCN4 fragments; complex with a cell entry inhibitor
    9. Domains for 1gzl:
      1. 345674Domain d1gzl.1: 1gzl A:,C: [76422]
      2. 345675Domain d1gzl.2: 1gzl B:,D: [76423]
        fusion protein between gp41 and GCN4 fragments; complex with a cell entry inhibitor
    10. Domain for 1i5x:
    11. Domain for 1i5y:
    12. Domain for 1k33:
    13. Domain for 1k34:
    14. Domain for 1qr8:
    15. Domain for 1qr9:
    16. Domain for 1szt:
  2. 345690Simian immunodeficiency virus [58073] (10 PDB entries)
    1. Domains for 1jpx:
      1. 345698Domain d1jpxa_: 1jpx A: [71783]
      2. 345699Domain d1jpxd_: 1jpx D: [71784]
      3. 345700Domain d1jpxg_: 1jpx G: [71785]
    2. Domain for 1jq0:
    3. Domains for 1qbz:
      1. 345691Domain d1qbza_: 1qbz A: [45729]
      2. 345692Domain d1qbzb_: 1qbz B: [45730]
      3. 345693Domain d1qbzc_: 1qbz C: [45731]
        ectodomain
    4. Domains for 1qce:
      1. 345716Domain d1qcea_: 1qce A: [45750]
      2. 345717Domain d1qceb_: 1qce B: [45751]
      3. 345718Domain d1qcec_: 1qce C: [45752]
        ectodomain
    5. Domains for 2ezo:
      1. 345713Domain d2ezoa_: 2ezo A: [45747]
      2. 345714Domain d2ezob_: 2ezo B: [45748]
      3. 345715Domain d2ezoc_: 2ezo C: [45749]
        ectodomain
    6. Domains for 2ezp:
      1. 345701Domain d2ezpa_: 2ezp A: [45735]
      2. 345702Domain d2ezpb_: 2ezp B: [45736]
      3. 345703Domain d2ezpc_: 2ezp C: [45737]
        ectodomain
    7. Domains for 2ezq:
      1. 345704Domain d2ezqa_: 2ezq A: [45738]
      2. 345705Domain d2ezqb_: 2ezq B: [45739]
      3. 345706Domain d2ezqc_: 2ezq C: [45740]
        ectodomain
    8. Domains for 2ezr:
      1. 345707Domain d2ezra_: 2ezr A: [45741]
      2. 345708Domain d2ezrb_: 2ezr B: [45742]
      3. 345709Domain d2ezrc_: 2ezr C: [45743]
        ectodomain
    9. Domains for 2ezs:
      1. 345710Domain d2ezsa_: 2ezs A: [45744]
      2. 345711Domain d2ezsb_: 2ezs B: [45745]
      3. 345712Domain d2ezsc_: 2ezs C: [45746]
        ectodomain
    10. Domains for 2siv:
      1. 345695Domain d2siv.1: 2siv A:,B: [45732]
      2. 345696Domain d2siv.2: 2siv C:,D: [45733]
      3. 345697Domain d2siv.3: 2siv E:,F: [45734]
  3. 345719Visna virus [TaxId:11741] [64597] (1 PDB entry)

More info for Protein Retrovius gp41 protease-resistant core from h.3.2.1: Virus ectodomain

Timeline for Protein Retrovius gp41 protease-resistant core from h.3.2.1: Virus ectodomain: