SCOPe 2.06: Family g.50.1.2: PHD domain

Lineage for Family g.50.1.2: PHD domain

1. Root: SCOPe 2.06

2. Class g: Small proteins [56992] (94 folds)

3. Fold g.50: FYVE/PHD zinc finger [57902] (2 superfamilies)
   dimetal(zinc)-bound alpha+beta fold

4. Superfamily g.50.1: FYVE/PHD zinc finger [57903] (4 families)

5. Family g.50.1.2: PHD domain [57911] (14 proteins)

Proteins:

1. Death associated transcription factor 1, Datf1 (DIO-1) [118332] (1 species)

   • Species Mouse (Mus musculus) [TaxId:10090] [118333] (1 PDB entry)
     Uniprot Q8C9B9 257-319

2. Inhibitor of growth protein 4, Ing4 [118334] (2 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [161223] (3 PDB entries)

   2. Species Mouse (Mus musculus) [TaxId:10090] [118335] (2 PDB entries)
      Uniprot Q8C0D7 188-245

3. Mi2-beta (CHD4) [90226] (1 species)
   chromodomain-helicase-DNA-binding protein 4

   • Species Human (Homo sapiens) [TaxId:9606] [90227] (3 PDB entries)

4. Nuclear corepressor KAP-1 (TIF-1beta) [57914] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [57915] (1 PDB entry)

5. PHD finger protein 22 [118342] (1 species)

   • Species Mouse (Mus musculus) [TaxId:10090] [118343] (1 PDB entry)
     Uniprot Q9D168 150-224

6. PHD finger protein 7 (NYD-SP6) [118338] (1 species)

   • Species Mouse (Mus musculus) [TaxId:10090] [118339] (1 PDB entry)
     Uniprot Q9DAG9 232-304

7. PHD finger protein 8 [118336] (1 species)

   • Species Mouse (Mus musculus) [TaxId:10090] [118337] (1 PDB entry)
     Uniprot Q80TJ7 1-66

8. PHD finger protein At1g33420 [118330] (1 species)

   • Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [118331] (1 PDB entry)
     Uniprot Q9C810 595-653

9. PHD finger protein At5g26210 [118328] (1 species)

   • Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [118329] (1 PDB entry)
     Uniprot O81488 201-251

10. PHD Inhibitor of growth protein 2, Ing2 [118340] (1 species)

    • Species Mouse (Mus musculus) [TaxId:10090] [118341] (1 PDB entry)
      Uniprot Q9ESK4 205-262

11. Sumoylation ligase E3, SIZ1 [118344] (1 species)

    • Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [118345] (1 PDB entry)
      Uniprot Q680Q4 104-168

12. V(D)J recombination-activating protein 2, Rag2 [161224] (1 species)

    • Species Mouse (Mus musculus) [TaxId:10090] [161225] (2 PDB entries)
      Uniprot P21784 414-487

13. Williams-Beuren syndrome transcription factor, WSTF [57912] (1 species)

    • Species Human (Homo sapiens) [TaxId:9606] [57913] (1 PDB entry)

14. automated matches [190654] (2 species)
    not a true protein

    1. Species Human (Homo sapiens) [TaxId:9606] [188436] (5 PDB entries)

    2. Species Mouse (Mus musculus) [TaxId:10090] [187735] (7 PDB entries)

More info for Family g.50.1.2: PHD domain

Timeline for Family g.50.1.2: PHD domain:

• Family g.50.1.2: PHD domain first appeared (with stable ids) in SCOP 1.55
  
• Family g.50.1.2: PHD domain appears in SCOPe 2.05
  
• Family g.50.1.2: PHD domain appears in SCOPe 2.07
  
• Family g.50.1.2: PHD domain appears in the current release, SCOPe 2.08