Lineage for Protein: Bacteriorhodopsin

  1. Root: SCOP 1.63
  2. 267451Class f: Membrane and cell surface proteins and peptides [56835] (34 folds)
  3. 267760Fold f.13: Family A G protein-coupled receptor-like [81322] (1 superfamily)
    core: up-and-down bundle of seven transmembrane helices tilted 20 degrees with respect to the plane of the membrane
  4. 267761Superfamily f.13.1: Family A G protein-coupled receptor-like [81321] (2 families) (S)
  5. 267762Family f.13.1.1: Bacteriorhodopsin-like [81319] (3 proteins)
  6. 267763Protein Bacteriorhodopsin [56871] (2 species)
    a light-driven proton pump

Species:

  1. 267764Archaeon Halobacterium halobium [TaxId:2242] [56872] (3 PDB entries)
    1. Domain for 1bm1:
    2. Domain for 1brd:
    3. Domain for 2brd:
  2. 267768Halobacterium salinarum [TaxId:2242] [56873] (31 PDB entries)
    1. Domain for 1ap9:
    2. Domain for 1at9:
    3. Domains for 1brr:
      1. 267797Domain d1brra_: 1brr A: [43421]
      2. 267798Domain d1brrb_: 1brr B: [43422]
      3. 267799Domain d1brrc_: 1brr C: [43423]
        complexed with arc, gas, glc, man, oct, ret
    4. Domain for 1brx:
    5. Domain for 1c3w:
    6. Domain for 1c8r:
    7. Domain for 1c8s:
    8. Domains for 1cwq:
      1. 267785Domain d1cwqa_: 1cwq A: [43412]
      2. 267786Domain d1cwqb_: 1cwq B: [43413]
        M intermediate structure (A) superimposed on the ground state structure (B)
        complexed with hex, oct, ret, trd, und
    9. Domain for 1dze:
      • 267794Domain d1dzea_: 1dze A: [43419]
        M intermediate trapped at 100K
        complexed with gal, glc, l1p, l2p, l3p, l4p, man, ret
    10. Domains for 1e0p:
      1. 267790Domain d1e0pa_: 1e0p A: [43416]
      2. 267791Domain d1e0pb_: 1e0p B: [43417]
        L intermediate
        complexed with ret
    11. Domain for 1f4z:
    12. Domain for 1f50:
    13. Domain for 1fbb:
    14. Domain for 1fbk:
    15. Domain for 1iw6:
      • 267792Domain d1iw6a_: 1iw6 A: [76865]
        ground state
        complexed with gal, glc, l2p, l3p, man, ret
    16. Domain for 1ixf:
      • 267796Domain d1ixfa_: 1ixf A: [76908]
        K intermediate
        complexed with gal, glc, l2p, l3p, man, ret
    17. Domain for 1jv6:
    18. Domain for 1jv7:
    19. Domain for 1kg8:
      • 267778Domain d1kg8a_: 1kg8 A: [68579]
        an early-M intermediate
        complexed with li1, ret
    20. Domain for 1kg9:
      • 267777Domain d1kg9a_: 1kg9 A: [68580]
        a "mock-trapped" early-M intermediate
        complexed with li1, ret
    21. Domain for 1kgb:
    22. Domains for 1kme:
      1. 267782Domain d1kmea_: 1kme A: [68692]
      2. 267783Domain d1kmeb_: 1kme B: [68693]
        complexed with glc, ret, squ
    23. Domain for 1l0m:
    24. Domain for 1m0k:
    25. Domain for 1m0l:
    26. Domain for 1m0m:
    27. Domain for 1qhj:
    28. Domain for 1qko:
    29. Domain for 1qkp:
    30. Domain for 1qm8:
      • 267795Domain d1qm8a_: 1qm8 A: [43420]
        complexed with gal, glc, l1p, l2p, l3p, l4p, man, ret
    31. Domain for 2at9:

More info for Protein Bacteriorhodopsin from f.13.1.1: Bacteriorhodopsin-like

Timeline for Protein Bacteriorhodopsin from f.13.1.1: Bacteriorhodopsin-like: