SCOP 1.69: Protein: Viral RNA polymerase

Lineage for Protein: Viral RNA polymerase

Root: SCOP 1.69
Class e: Multi-domain proteins (alpha and beta) [56572] (46 folds)
Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
Superfamily e.8.1: DNA/RNA polymerases [56672] (6 families)
"palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (2 proteins)
Protein Viral RNA polymerase [56695] (9 species)

Species:

Bovine viral diarrhea virus [TaxId:11099] [103401] (3 PDB entries)
1. Domain for 1s48:
  - Domain d1s48a_: 1s48 A: [98475]
2. Domain for 1s49:
  - Domain d1s49a_: 1s49 A: [98476]
3. Domains for 1s4f:
  1. Domain d1s4fa_: 1s4f A: [98495]
  2. Domain d1s4fb_: 1s4f B: [98496]
  3. Domain d1s4fc_: 1s4f C: [98497]
  4. Domain d1s4fd_: 1s4f D: [98498]
Foot-and-mouth disease virus [111302] (2 PDB entries)
1. Domain for 1u09:
  - Domain d1u09a_: 1u09 A: [107545]
2. Domain for 1wne:
  - Domain d1wnea_: 1wne A: [109434]
Hepatitis C virus [TaxId:11103] [56697] (11 PDB entries)
1. Domains for 1c2p:
  1. Domain d1c2pa_: 1c2p A: [43117]
  2. Domain d1c2pb_: 1c2p B: [43118]
2. Domains for 1csj:
  1. Domain d1csja_: 1csj A: [43120]
  2. Domain d1csjb_: 1csj B: [43121]
3. Domain for 1gx5:
  - Domain d1gx5a_: 1gx5 A: [70682]
4. Domain for 1gx6:
  - Domain d1gx6a_: 1gx6 A: [70683]
5. Domains for 1nb4:
  1. Domain d1nb4a_: 1nb4 A: [85509]
  2. Domain d1nb4b_: 1nb4 B: [85510]
6. Domains for 1nb6:
  1. Domain d1nb6a_: 1nb6 A: [85511]
  2. Domain d1nb6b_: 1nb6 B: [85512]
7. Domains for 1nb7:
  1. Domain d1nb7a_: 1nb7 A: [85513]
  2. Domain d1nb7b_: 1nb7 B: [85514]
8. Domains for 1nhu:
  1. Domain d1nhua_: 1nhu A: [85723]
  2. Domain d1nhub_: 1nhu B: [85724]
9. Domains for 1nhv:
  1. Domain d1nhva_: 1nhv A: [85725]
  2. Domain d1nhvb_: 1nhv B: [85726]
10. Domain for 1os5:
  - Domain d1os5a_: 1os5 A: [93475]
11. Domain for 1quv:
  - Domain d1quva_: 1quv A: [43119]
Human rhinovirus 14, HRV-14 [TaxId:12131] [111301] (1 PDB entry)
- Domain for 1teb:
  - Domain d1teba_: 1teb A: [106806]
Human rhinovirus 16, HRV-16 [TaxId:31708] [111300] (1 PDB entry)
- Domains for 1te9:
  1. Domain d1te9a_: 1te9 A: [106802]
  2. Domain d1te9b_: 1te9 B: [106803]
Human rhinovirus 1B, HRV-1B [TaxId:12129] [111299] (1 PDB entry)
- Domain for 1te8:
  - Domain d1te8a_: 1te8 A: [106801]
Norwalk virus [TaxId:11983] [103400] (3 PDB entries)
1. Domains for 1sh0:
  1. Domain d1sh0a_: 1sh0 A: [98876]
  2. Domain d1sh0b_: 1sh0 B: [98877]
2. Domain for 1sh2:
  - Domain d1sh2a_: 1sh2 A: [98878]
3. Domains for 1sh3:
  1. Domain d1sh3a_: 1sh3 A: [98879]
  2. Domain d1sh3b_: 1sh3 B: [98880]
Poliovirus type 1, strain Mahoney [TaxId:12080] [56696] (5 PDB entries)
1. Domain for 1ra6:
  - Domain d1ra6a_: 1ra6 A: [104879]
2. Domain for 1ra7:
  - Domain d1ra7a_: 1ra7 A: [104880]
3. Domain for 1raj:
  - Domain d1raja_: 1raj A: [104881]
4. Domain for 1rdr:
  - Domain d1rdr__: 1rdr - [43116]
5. Domain for 1tql:
  - Domain d1tqla_: 1tql A: [107235]
Rabbit hemorrhagic disease virus [TaxId:11976] [69882] (2 PDB entries)
1. Domains for 1khv:
  1. Domain d1khva_: 1khv A: [68627]
  2. Domain d1khvb_: 1khv B: [68628]
2. Domains for 1khw:
  1. Domain d1khwa_: 1khw A: [68629]
  2. Domain d1khwb_: 1khw B: [68630]

More info for Protein Viral RNA polymerase from e.8.1.4: RNA-dependent RNA-polymerase

Timeline for Protein Viral RNA polymerase from e.8.1.4: RNA-dependent RNA-polymerase:

Protein Viral RNA polymerase from e.8.1.4: RNA-dependent RNA-polymerase first appeared (with stable ids) in SCOP 1.55, called Protein RNA-dependent RNA-polymerase from e.8.1.4: RNA-dependent RNA-polymerase
Protein Viral RNA polymerase from e.8.1.4: RNA-dependent RNA-polymerase appears in SCOP 1.67
Protein Viral RNA polymerase from e.8.1.4: RNA-dependent RNA-polymerase appears in SCOP 1.71
Protein Viral RNA polymerase from e.8.1.4: RNA-dependent RNA-polymerase appears in the current release, SCOPe 2.08