Lineage for Protein: Class D beta-lactamase

  1. Root: SCOPe 2.04
  2. 1689992Class e: Multi-domain proteins (alpha and beta) [56572] (68 folds)
  3. 1690252Fold e.3: beta-lactamase/transpeptidase-like [56600] (1 superfamily)
    contains a cluster of helices and an alpha+beta sandwich
  4. 1690253Superfamily e.3.1: beta-lactamase/transpeptidase-like [56601] (4 families) (S)
  5. 1690254Family e.3.1.1: beta-Lactamase/D-ala carboxypeptidase [56602] (19 proteins)
  6. 1690658Protein Class D beta-lactamase [56622] (4 species)

Species:

  1. 1690659Escherichia coli, OXA-1 [TaxId:562] [82837] (3 PDB entries)
    1. Domains for 1m6k:
      1. 1690662Domain d1m6ka_: 1m6k A: [78695]
        complexed with mpd
      2. 1690663Domain d1m6kb_: 1m6k B: [78696]
        complexed with mpd
    2. Domains for 3isg:
      1. 1690660Domain d3isga_: 3isg A: [178589]
        automated match to d1m6ka_
        complexed with drw, mpd
      2. 1690661Domain d3isgb_: 3isg B: [178590]
        automated match to d1m6ka_
        complexed with drw, mpd
    3. Domains for 4mll:
      1. 1690664Domain d4mlla_: 4mll A: [228263]
        automated match to d4f7yd_
        complexed with 1s6, mpd, po4
      2. 1690665Domain d4mllb_: 4mll B: [228264]
        automated match to d4f7yb_
        complexed with 1s6, mpd, po4
      3. 1690666Domain d4mllc_: 4mll C: [228265]
        automated match to d4f7yb_
        complexed with 1s6, mpd, po4
      4. 1690667Domain d4mlld_: 4mll D: [228262]
        automated match to d4f7yd_
        complexed with 1s6, mpd, po4
  2. 1690668Pseudomonas aeruginosa, OXA-10 [TaxId:287] [56623] (25 PDB entries)
    1. Domains for 1e3u:
      1. 1690677Domain d1e3ua_: 1e3u A: [42755]
        complexed with auc, edo, so4
      2. 1690678Domain d1e3ub_: 1e3u B: [42756]
        complexed with auc, edo, so4
      3. 1690679Domain d1e3uc_: 1e3u C: [42757]
        complexed with auc, edo, so4
      4. 1690680Domain d1e3ud_: 1e3u D: [42758]
        complexed with auc, edo, so4
    2. Domains for 1e4d:
      1. 1690689Domain d1e4da_: 1e4d A: [42759]
        complexed with edo, so4
      2. 1690690Domain d1e4db_: 1e4d B: [42760]
        complexed with edo, so4
      3. 1690691Domain d1e4dc_: 1e4d C: [42761]
        complexed with edo, so4
      4. 1690692Domain d1e4dd_: 1e4d D: [42762]
        complexed with edo, so4
    3. Domains for 1ewz:
      1. 1690725Domain d1ewza_: 1ewz A: [42765]
      2. 1690726Domain d1ewzb_: 1ewz B: [42766]
      3. 1690727Domain d1ewzc_: 1ewz C: [42767]
      4. 1690728Domain d1ewzd_: 1ewz D: [42768]
    4. Domains for 1fof:
      1. 1690705Domain d1fofa_: 1fof A: [42763]
        complexed with co, so4
      2. 1690706Domain d1fofb_: 1fof B: [42764]
        complexed with co, so4
    5. Domains for 1k4e:
      1. 1690715Domain d1k4ea_: 1k4e A: [68136]
        complexed with so4
      2. 1690716Domain d1k4eb_: 1k4e B: [68137]
        complexed with so4
    6. Domains for 1k4f:
      1. 1690675Domain d1k4fa_: 1k4f A: [68138]
        complexed with so4
      2. 1690676Domain d1k4fb_: 1k4f B: [68139]
        complexed with so4
    7. Domains for 1k54:
      1. 1690681Domain d1k54a_: 1k54 A: [68152]
        complexed with edo, hoq, so4
      2. 1690682Domain d1k54b_: 1k54 B: [68153]
        complexed with edo, hoq, so4
      3. 1690683Domain d1k54c_: 1k54 C: [68154]
        complexed with edo, hoq, so4
      4. 1690684Domain d1k54d_: 1k54 D: [68155]
        complexed with edo, hoq, so4
    8. Domains for 1k55:
      1. 1690671Domain d1k55a_: 1k55 A: [68156]
        complexed with edo, so4
      2. 1690672Domain d1k55b_: 1k55 B: [68157]
        complexed with edo, so4
      3. 1690673Domain d1k55c_: 1k55 C: [68158]
        complexed with edo, so4
      4. 1690674Domain d1k55d_: 1k55 D: [68159]
        complexed with edo, so4
    9. Domains for 1k56:
      1. 1690701Domain d1k56a_: 1k56 A: [68160]
        complexed with so4
      2. 1690702Domain d1k56b_: 1k56 B: [68161]
        complexed with so4
      3. 1690703Domain d1k56c_: 1k56 C: [68162]
        complexed with so4
      4. 1690704Domain d1k56d_: 1k56 D: [68163]
        complexed with so4
    10. Domains for 1k57:
      1. 1690697Domain d1k57a_: 1k57 A: [68164]
        complexed with so4
      2. 1690698Domain d1k57b_: 1k57 B: [68165]
        complexed with so4
      3. 1690699Domain d1k57c_: 1k57 C: [68166]
        complexed with so4
      4. 1690700Domain d1k57d_: 1k57 D: [68167]
        complexed with so4
    11. Domains for 1k6r:
      1. 1690723Domain d1k6ra_: 1k6r A: [84305]
        complexed with mx1
      2. 1690724Domain d1k6rb_: 1k6r B: [84306]
        complexed with mx1
    12. Domains for 1k6s:
      1. 1690713Domain d1k6sa_: 1k6s A: [84307]
        complexed with ca, iap, so4
      2. 1690714Domain d1k6sb_: 1k6s B: [84308]
        complexed with ca, iap, so4
    13. Domains for 2hp5:
      1. 1690733Domain d2hp5a_: 2hp5 A: [165193]
        automated match to d1k4fb_
        complexed with co, so4; mutant
      2. 1690734Domain d2hp5b_: 2hp5 B: [165194]
        automated match to d1k4fb_
        complexed with co, so4; mutant
      3. 1690735Domain d2hp5c_: 2hp5 C: [165195]
        automated match to d1k4fb_
        complexed with co, so4; mutant
      4. 1690736Domain d2hp5d_: 2hp5 D: [165196]
        automated match to d1k4fb_
        complexed with co, so4; mutant
    14. Domains for 2hp6:
      1. 1690717Domain d2hp6a_: 2hp6 A: [165197]
        automated match to d1k4fb_
        complexed with so4; mutant
      2. 1690718Domain d2hp6b_: 2hp6 B: [165198]
        automated match to d1k4fb_
        complexed with so4; mutant
    15. Domains for 2hp9:
      1. 1690729Domain d2hp9a_: 2hp9 A: [165199]
        automated match to d1k4fb_
        complexed with so4; mutant
      2. 1690730Domain d2hp9b_: 2hp9 B: [165200]
        automated match to d1k4fb_
        complexed with so4; mutant
    16. Domains for 2hpb:
      1. 1690721Domain d2hpba_: 2hpb A: [165201]
        automated match to d1k4fb_
        complexed with so4; mutant
      2. 1690722Domain d2hpbb_: 2hpb B: [165202]
        automated match to d1k4fb_
        complexed with so4; mutant
    17. Domains for 2rl3:
      1. 1690693Domain d2rl3a_: 2rl3 A: [168173]
        automated match to d1k4fb_
        complexed with edo, gol, so4; mutant
      2. 1690694Domain d2rl3b_: 2rl3 B: [168174]
        automated match to d1k4fb_
        complexed with edo, gol, so4; mutant
    18. Domains for 2wgi:
      1. 1690731Domain d2wgia_: 2wgi A: [169326]
        automated match to d1k4fb_
        complexed with gol, pnm
      2. 1690732Domain d2wgib_: 2wgi B: [169327]
        automated match to d1k4fb_
        complexed with gol, pnm
    19. Domains for 2wgv:
      1. 1690687Domain d2wgva_: 2wgv A: [169335]
        automated match to d1k4fb_
        complexed with cit, cl, gol, so4; mutant
      2. 1690688Domain d2wgvb_: 2wgv B: [169336]
        automated match to d1k4fb_
        complexed with cit, cl, gol, so4; mutant
    20. Domains for 2wgw:
      1. 1690685Domain d2wgwa_: 2wgw A: [169337]
        automated match to d1k4fb_
        complexed with gol, so4; mutant
      2. 1690686Domain d2wgwb_: 2wgw B: [169338]
        automated match to d1k4fb_
        complexed with gol, so4; mutant
    21. Domains for 2wkh:
      1. 1690695Domain d2wkha_: 2wkh A: [169403]
        automated match to d1k4fb_
        complexed with so4, zz7
      2. 1690696Domain d2wkhb_: 2wkh B: [169404]
        automated match to d1k4fb_
        complexed with so4, zz7
    22. Domains for 2wki:
      1. 1690711Domain d2wkia_: 2wki A: [169405]
        automated match to d1k4fb_
        complexed with edo, gol, so4; mutant
      2. 1690712Domain d2wkib_: 2wki B: [169406]
        automated match to d1k4fb_
        complexed with edo, gol, so4; mutant
    23. Domains for 2x01:
      1. 1690719Domain d2x01a_: 2x01 A: [169739]
        automated match to d1k4fb_
        complexed with dms, pg4, so4; mutant
      2. 1690720Domain d2x01b_: 2x01 B: [169740]
        automated match to d1k4fb_
        complexed with dms, pg4, so4; mutant
    24. Domains for 2x02:
      1. 1690669Domain d2x02a_: 2x02 A: [169741]
        automated match to d1k4fb_
        complexed with dms, gol, pg4, so4
      2. 1690670Domain d2x02b_: 2x02 B: [169742]
        automated match to d1k4fb_
        complexed with dms, gol, pg4, so4
    25. Domains for 3lce:
      1. 1690707Domain d3lcea_: 3lce A: [180180]
        automated match to d1e4dc_
        complexed with gol, lce, po4
      2. 1690708Domain d3lceb_: 3lce B: [180181]
        automated match to d1e4dc_
        complexed with gol, lce, po4
      3. 1690709Domain d3lcec_: 3lce C: [180182]
        automated match to d1e4dc_
        complexed with gol, lce, po4
      4. 1690710Domain d3lced_: 3lce D: [180183]
        automated match to d1e4dc_
        complexed with gol, lce, po4
  3. 1690737Pseudomonas aeruginosa, OXA-13 [TaxId:287] [64474] (3 PDB entries)
    1. Domains for 1h5x:
      1. 1690740Domain d1h5xa_: 1h5x A: [70899]
        complexed with im2, so4
      2. 1690741Domain d1h5xb_: 1h5x B: [70900]
        complexed with im2, so4
    2. Domains for 1h8y:
      1. 1690742Domain d1h8ya_: 1h8y A: [60801]
        complexed with mer, so4
      2. 1690743Domain d1h8yb_: 1h8y B: [60802]
        complexed with mer, so4
    3. Domains for 1h8z:
      1. 1690738Domain d1h8za_: 1h8z A: [60803]
        complexed with so4
      2. 1690739Domain d1h8zb_: 1h8z B: [60804]
        complexed with so4
  4. 1690744Salmonella typhimurium, OXA-2 [TaxId:90371] [90083] (1 PDB entry)

More info for Protein Class D beta-lactamase from e.3.1.1: beta-Lactamase/D-ala carboxypeptidase

Timeline for Protein Class D beta-lactamase from e.3.1.1: beta-Lactamase/D-ala carboxypeptidase: