SCOPe 2.08: Species: Norway rat (Rattus norvegicus) [TaxId: 10116]

Lineage for Species: Norway rat (Rattus norvegicus) [TaxId: 10116]

Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
Fold d.169: C-type lectin-like [56435] (1 superfamily)
unusual fold
Superfamily d.169.1: C-type lectin-like [56436] (9 families)
Family d.169.1.1: C-type lectin domain [56437] (29 proteins)
Pfam PF00059
Protein Mannose-binding protein A, C-lectin domain [56458] (2 species)
Species Norway rat (Rattus norvegicus) [TaxId:10116] [56460] (38 PDB entries)

PDB entries in Species: Norway rat (Rattus norvegicus) [TaxId: 10116]:

Domain(s) for 1afa:
1. Domain d1afa11: 1afa 1:105-226 [42402]
  Other proteins in same PDB: d1afa12, d1afa22, d1afa32
  complexed with ca, cl, mbg
2. Domain d1afa21: 1afa 2:105-226 [42403]
  Other proteins in same PDB: d1afa12, d1afa22, d1afa32
  complexed with ca, cl, mbg
3. Domain d1afa31: 1afa 3:105-226 [42404]
  Other proteins in same PDB: d1afa12, d1afa22, d1afa32
  complexed with ca, cl, mbg
Domain(s) for 1afb:
1. Domain d1afb11: 1afb 1:105-226 [42384]
  Other proteins in same PDB: d1afb12, d1afb22, d1afb32
  complexed with ca, cl, nga
2. Domain d1afb21: 1afb 2:105-226 [42385]
  Other proteins in same PDB: d1afb12, d1afb22, d1afb32
  complexed with ca, cl, nga
3. Domain d1afb31: 1afb 3:105-226 [42386]
  Other proteins in same PDB: d1afb12, d1afb22, d1afb32
  complexed with ca, cl, nga
Domain(s) for 1afd:
1. Domain d1afd11: 1afd 1:105-226 [42408]
  Other proteins in same PDB: d1afd12, d1afd22, d1afd32
  complexed with ca, cl
2. Domain d1afd21: 1afd 2:105-226 [42409]
  Other proteins in same PDB: d1afd12, d1afd22, d1afd32
  complexed with ca, cl
3. Domain d1afd31: 1afd 3:105-226 [42410]
  Other proteins in same PDB: d1afd12, d1afd22, d1afd32
  complexed with ca, cl
Domain(s) for 1bch:
1. Domain d1bch11: 1bch 1:105-226 [42399]
  Other proteins in same PDB: d1bch12, d1bch22, d1bch32
  complexed with a2g, ca, cl, na, nga; mutant
2. Domain d1bch21: 1bch 2:105-226 [42400]
  Other proteins in same PDB: d1bch12, d1bch22, d1bch32
  complexed with a2g, ca, cl, na, nga; mutant
3. Domain d1bch31: 1bch 3:105-226 [42401]
  Other proteins in same PDB: d1bch12, d1bch22, d1bch32
  complexed with a2g, ca, cl, na, nga; mutant
Domain(s) for 1bcj:
1. Domain d1bcj11: 1bcj 1:105-226 [42411]
  Other proteins in same PDB: d1bcj12, d1bcj22, d1bcj32
  complexed with ca, cl, nga; mutant
2. Domain d1bcj21: 1bcj 2:105-226 [42412]
  Other proteins in same PDB: d1bcj12, d1bcj22, d1bcj32
  complexed with ca, cl, nga; mutant
3. Domain d1bcj31: 1bcj 3:105-226 [42413]
  Other proteins in same PDB: d1bcj12, d1bcj22, d1bcj32
  complexed with ca, cl, nga; mutant
Domain(s) for 1buu:
- Domain d1buua1: 1buu A:105-221 [42366]
  Other proteins in same PDB: d1buua2
  complexed with ho
Domain(s) for 1bv4:
1. Domain d1bv4a_: 1bv4 A: [42380]
2. Domain d1bv4b_: 1bv4 B: [42381]
3. Domain d1bv4c_: 1bv4 C: [42382]
  missing some secondary structures that made up less than one-third of the common domain
4. Domain d1bv4d_: 1bv4 D: [42383]
Domain(s) for 1fif:
1. Domain d1fifa1: 1fif A:105-226 [42373]
  Other proteins in same PDB: d1fifa2, d1fifb2, d1fifc2
  complexed with ca, cl; mutant
2. Domain d1fifb1: 1fif B:105-226 [42374]
  Other proteins in same PDB: d1fifa2, d1fifb2, d1fifc2
  complexed with ca, cl; mutant
3. Domain d1fifc1: 1fif C:105-226 [42375]
  Other proteins in same PDB: d1fifa2, d1fifb2, d1fifc2
  complexed with ca, cl; mutant
Domain(s) for 1fih:
1. Domain d1fiha1: 1fih A:105-226 [42396]
  Other proteins in same PDB: d1fiha2, d1fihb2, d1fihc2
  complexed with ca, cl, nga; mutant
2. Domain d1fihb1: 1fih B:105-226 [42397]
  Other proteins in same PDB: d1fiha2, d1fihb2, d1fihc2
  complexed with ca, cl, nga; mutant
3. Domain d1fihc1: 1fih C:105-226 [42398]
  Other proteins in same PDB: d1fiha2, d1fihb2, d1fihc2
  complexed with ca, cl, nga; mutant
Domain(s) for 1kmb:
1. Domain d1kmb11: 1kmb 1:105-221 [42405]
  Other proteins in same PDB: d1kmb12, d1kmb22, d1kmb32
  complexed with ca, cl; mutant
2. Domain d1kmb21: 1kmb 2:105-221 [42406]
  Other proteins in same PDB: d1kmb12, d1kmb22, d1kmb32
  complexed with ca, cl; mutant
3. Domain d1kmb31: 1kmb 3:105-221 [42407]
  Other proteins in same PDB: d1kmb12, d1kmb22, d1kmb32
  complexed with ca, cl; mutant
Domain(s) for 1kwt:
1. Domain d1kwta1: 1kwt A:105-221 [73085]
  Other proteins in same PDB: d1kwta2, d1kwtb2, d1kwtc2
  complexed with ca, cl
2. Domain d1kwtb1: 1kwt B:105-221 [73087]
  Other proteins in same PDB: d1kwta2, d1kwtb2, d1kwtc2
  complexed with ca, cl
3. Domain d1kwtc1: 1kwt C:105-221 [73089]
  Other proteins in same PDB: d1kwta2, d1kwtb2, d1kwtc2
  complexed with ca, cl
Domain(s) for 1kwu:
1. Domain d1kwua1: 1kwu A:105-221 [73091]
  Other proteins in same PDB: d1kwua2, d1kwub2, d1kwuc2
  complexed with ca, cl, mma
2. Domain d1kwub1: 1kwu B:105-221 [73093]
  Other proteins in same PDB: d1kwua2, d1kwub2, d1kwuc2
  complexed with ca, cl, mma
3. Domain d1kwuc1: 1kwu C:105-221 [73095]
  Other proteins in same PDB: d1kwua2, d1kwub2, d1kwuc2
  complexed with ca, cl, mma
Domain(s) for 1kwv:
1. Domain d1kwva1: 1kwv A:105-221 [73097]
  Other proteins in same PDB: d1kwva2, d1kwvb2, d1kwvc2
  complexed with ca, cl, nag
2. Domain d1kwvb1: 1kwv B:105-221 [73099]
  Other proteins in same PDB: d1kwva2, d1kwvb2, d1kwvc2
  complexed with ca, cl, nag
3. Domain d1kwvc1: 1kwv C:105-221 [73101]
  Other proteins in same PDB: d1kwva2, d1kwvb2, d1kwvc2
  complexed with ca, cl, nag
Domain(s) for 1kww:
1. Domain d1kwwa1: 1kww A:105-221 [73103]
  Other proteins in same PDB: d1kwwa2, d1kwwb2, d1kwwc2
  complexed with ca, cl, mfu
2. Domain d1kwwb1: 1kww B:105-221 [73105]
  Other proteins in same PDB: d1kwwa2, d1kwwb2, d1kwwc2
  complexed with ca, cl, mfu
3. Domain d1kwwc1: 1kww C:105-221 [73107]
  Other proteins in same PDB: d1kwwa2, d1kwwb2, d1kwwc2
  complexed with ca, cl, mfu
Domain(s) for 1kwx:
1. Domain d1kwxa1: 1kwx A:105-221 [73109]
  Other proteins in same PDB: d1kwxa2, d1kwxb2, d1kwxc2
  complexed with ca, cl, mfb
2. Domain d1kwxb1: 1kwx B:105-221 [73111]
  Other proteins in same PDB: d1kwxa2, d1kwxb2, d1kwxc2
  complexed with ca, cl, mfb
3. Domain d1kwxc1: 1kwx C:105-221 [73113]
  Other proteins in same PDB: d1kwxa2, d1kwxb2, d1kwxc2
  complexed with ca, cl, mfb
Domain(s) for 1kwy:
1. Domain d1kwya1: 1kwy A:105-221 [73115]
  Other proteins in same PDB: d1kwya2, d1kwyb2, d1kwyc2
  complexed with ca, cl
2. Domain d1kwyb1: 1kwy B:105-221 [73117]
  Other proteins in same PDB: d1kwya2, d1kwyb2, d1kwyc2
  complexed with ca, cl
3. Domain d1kwyc1: 1kwy C:105-221 [73119]
  Other proteins in same PDB: d1kwya2, d1kwyb2, d1kwyc2
  complexed with ca, cl
Domain(s) for 1kwz:
1. Domain d1kwza1: 1kwz A:105-221 [73121]
  Other proteins in same PDB: d1kwza2, d1kwzb2, d1kwzc2
  complexed with ca, cl
2. Domain d1kwzb1: 1kwz B:105-221 [73123]
  Other proteins in same PDB: d1kwza2, d1kwzb2, d1kwzc2
  complexed with ca, cl
3. Domain d1kwzc1: 1kwz C:105-221 [73125]
  Other proteins in same PDB: d1kwza2, d1kwzb2, d1kwzc2
  complexed with ca, cl
Domain(s) for 1kx0:
1. Domain d1kx0a1: 1kx0 A:105-221 [73127]
  Other proteins in same PDB: d1kx0a2, d1kx0b2, d1kx0c2
  complexed with ca, cl
2. Domain d1kx0b1: 1kx0 B:105-221 [73129]
  Other proteins in same PDB: d1kx0a2, d1kx0b2, d1kx0c2
  complexed with ca, cl
3. Domain d1kx0c1: 1kx0 C:105-221 [73131]
  Other proteins in same PDB: d1kx0a2, d1kx0b2, d1kx0c2
  complexed with ca, cl
Domain(s) for 1kx1:
1. Domain d1kx1a1: 1kx1 A:105-221 [73133]
  Other proteins in same PDB: d1kx1a2, d1kx1b2, d1kx1c2, d1kx1d2, d1kx1e2, d1kx1f2
  complexed with ca, man
2. Domain d1kx1b1: 1kx1 B:105-221 [73135]
  Other proteins in same PDB: d1kx1a2, d1kx1b2, d1kx1c2, d1kx1d2, d1kx1e2, d1kx1f2
  complexed with ca, man
3. Domain d1kx1c1: 1kx1 C:105-221 [73137]
  Other proteins in same PDB: d1kx1a2, d1kx1b2, d1kx1c2, d1kx1d2, d1kx1e2, d1kx1f2
  complexed with ca, man
4. Domain d1kx1d1: 1kx1 D:105-221 [73139]
  Other proteins in same PDB: d1kx1a2, d1kx1b2, d1kx1c2, d1kx1d2, d1kx1e2, d1kx1f2
  complexed with ca, man
5. Domain d1kx1e1: 1kx1 E:105-221 [73141]
  Other proteins in same PDB: d1kx1a2, d1kx1b2, d1kx1c2, d1kx1d2, d1kx1e2, d1kx1f2
  complexed with ca, man
6. Domain d1kx1f1: 1kx1 F:105-221 [73143]
  Other proteins in same PDB: d1kx1a2, d1kx1b2, d1kx1c2, d1kx1d2, d1kx1e2, d1kx1f2
  complexed with ca, man
Domain(s) for 1kza:
1. Domain d1kza1_: 1kza 1: [73344]
  complexed with ca, cl, man
2. Domain d1kza2_: 1kza 2: [73345]
  complexed with ca, cl, man
Domain(s) for 1kzb:
1. Domain d1kzb1_: 1kzb 1: [73346]
  complexed with ca, man
2. Domain d1kzb2_: 1kzb 2: [73347]
  complexed with ca, man
Domain(s) for 1kzc:
1. Domain d1kzc1_: 1kzc 1: [73348]
  complexed with ca, cl, man
2. Domain d1kzc2_: 1kzc 2: [73349]
  complexed with ca, cl, man
Domain(s) for 1kzd:
1. Domain d1kzd1_: 1kzd 1: [73350]
  complexed with ca, nag
2. Domain d1kzd2_: 1kzd 2: [73351]
  complexed with ca, nag
Domain(s) for 1kze:
1. Domain d1kze1_: 1kze 1: [73352]
  complexed with ca, cl, man
2. Domain d1kze2_: 1kze 2: [73353]
  complexed with ca, cl, man
Domain(s) for 1msb:
1. Domain d1msba_: 1msb A: [42414]
  complexed with ho
2. Domain d1msbb_: 1msb B: [42415]
  complexed with ho
Domain(s) for 1rdi:
1. Domain d1rdi1_: 1rdi 1: [42367]
  complexed with ca, cl, mfu
2. Domain d1rdi2_: 1rdi 2: [42368]
  complexed with ca, cl, mfu
Domain(s) for 1rdj:
1. Domain d1rdj1_: 1rdj 1: [42369]
  complexed with ca, cl, mfb
2. Domain d1rdj2_: 1rdj 2: [42370]
  complexed with ca, cl, mfb
Domain(s) for 1rdk:
1. Domain d1rdk1_: 1rdk 1: [42376]
  complexed with ca, cl, gal
2. Domain d1rdk2_: 1rdk 2: [42377]
  complexed with ca, cl, gal
Domain(s) for 1rdl:
1. Domain d1rdl1_: 1rdl 1: [42359]
  complexed with ca, cl, mma
2. Domain d1rdl2_: 1rdl 2: [42360]
  complexed with ca, cl, mma
Domain(s) for 1rdm:
1. Domain d1rdm1_: 1rdm 1: [42378]
  complexed with ca, cl, mma
2. Domain d1rdm2_: 1rdm 2: [42379]
  complexed with ca, cl, mma
Domain(s) for 1rdn:
1. Domain d1rdn1_: 1rdn 1: [42371]
  complexed with ca, cl, ndg
2. Domain d1rdn2_: 1rdn 2: [42372]
  complexed with ca, cl, ndg
Domain(s) for 1rdo:
1. Domain d1rdo1_: 1rdo 1: [42357]
  complexed with ca, cl
2. Domain d1rdo2_: 1rdo 2: [42358]
  complexed with ca, cl
Domain(s) for 1rtm:
1. Domain d1rtm11: 1rtm 1:105-221 [42363]
  Other proteins in same PDB: d1rtm12, d1rtm22, d1rtm32
  complexed with ca, cl, gol
2. Domain d1rtm21: 1rtm 2:105-221 [42364]
  Other proteins in same PDB: d1rtm12, d1rtm22, d1rtm32
  complexed with ca, cl, gol
3. Domain d1rtm31: 1rtm 3:105-221 [42365]
  Other proteins in same PDB: d1rtm12, d1rtm22, d1rtm32
  complexed with ca, cl, gol
Domain(s) for 1ytt:
1. Domain d1ytta_: 1ytt A: [42361]
  complexed with yb
2. Domain d1yttb_: 1ytt B: [42362]
  complexed with yb
Domain(s) for 2kmb:
1. Domain d2kmb11: 2kmb 1:105-221 [42387]
  Other proteins in same PDB: d2kmb12, d2kmb22, d2kmb32
  complexed with ca, cl; mutant
2. Domain d2kmb21: 2kmb 2:105-221 [42388]
  Other proteins in same PDB: d2kmb12, d2kmb22, d2kmb32
  complexed with ca, cl; mutant
3. Domain d2kmb31: 2kmb 3:105-221 [42389]
  Other proteins in same PDB: d2kmb12, d2kmb22, d2kmb32
  complexed with ca, cl; mutant
Domain(s) for 2msb:
1. Domain d2msba_: 2msb A: [42355]
  complexed with ca
2. Domain d2msbb_: 2msb B: [42356]
  complexed with ca
Domain(s) for 3kmb:
1. Domain d3kmb11: 3kmb 1:105-221 [42390]
  Other proteins in same PDB: d3kmb12, d3kmb22, d3kmb32
  complexed with ca, cl, fuc; mutant
2. Domain d3kmb21: 3kmb 2:105-221 [42391]
  Other proteins in same PDB: d3kmb12, d3kmb22, d3kmb32
  complexed with ca, cl, fuc; mutant
3. Domain d3kmb31: 3kmb 3:105-221 [42392]
  Other proteins in same PDB: d3kmb12, d3kmb22, d3kmb32
  complexed with ca, cl, fuc; mutant
Domain(s) for 4kmb:
1. Domain d4kmb11: 4kmb 1:105-221 [42393]
  Other proteins in same PDB: d4kmb12, d4kmb22, d4kmb32
  complexed with ca, cl, fuc, zn; mutant
2. Domain d4kmb21: 4kmb 2:105-221 [42394]
  Other proteins in same PDB: d4kmb12, d4kmb22, d4kmb32
  complexed with ca, cl, fuc, zn; mutant
3. Domain d4kmb31: 4kmb 3:105-221 [42395]
  Other proteins in same PDB: d4kmb12, d4kmb22, d4kmb32
  complexed with ca, cl, fuc, zn; mutant

More info for Species Norway rat (Rattus norvegicus) [TaxId:10116] from d.169.1.1 Mannose-binding protein A, C-lectin domain

Timeline for Species Norway rat (Rattus norvegicus) [TaxId:10116] from d.169.1.1 Mannose-binding protein A, C-lectin domain:

Species Norway rat (Rattus norvegicus) [TaxId:10116] from d.169.1.1 Mannose-binding protein A, C-lectin domain first appeared (with stable ids) in SCOP 1.55, called Species Rat (Rattus norvegicus) [TaxId:10116] from d.169.1.1 Mannose-binding protein A, lectin domain
Species Norway rat (Rattus norvegicus) [TaxId:10116] from d.169.1.1 Mannose-binding protein A, C-lectin domain appears in SCOPe 2.07