Lineage for Family d.169.1.1: C-type lectin domain

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 3001353Fold d.169: C-type lectin-like [56435] (1 superfamily)
    unusual fold
  4. 3001354Superfamily d.169.1: C-type lectin-like [56436] (9 families) (S)
  5. 3001355Family d.169.1.1: C-type lectin domain [56437] (29 proteins)
    Pfam PF00059

Proteins:

  1. 3001356Aggrecan core protein [111260] (1 species)
  2. 3001359CD69 [56442] (1 species)
  3. 3001365CD94 [56440] (1 species)
  4. 3001374DC-SIGN (dendritic cell-specific ICAM-3 grabbing nonintegrin) [69855] (1 species)
  5. DC-SIGNR (DC-SIGN related receptor) [69857] (1 species)
  6. 3001409E-selectin, C-lectin domain [56456] (1 species)
    folowed by EGF-like module
  7. 3001413EBV gp42 [75583] (1 species)
  8. 3001416Eosinophil major basic protein [64457] (1 species)
  9. 3001422Galactose-specific C-type lectin [90061] (1 species)
  10. 3001434H1 subunit of the asialoglycoprotein receptor [56454] (1 species)
  11. 3001437Hypothetical protein F28B4.3 [118166] (1 species)
  12. 3001440Lectin CEL-I [111262] (1 species)
  13. 3001448Lectin TC14 [56463] (1 species)
  14. 3001454Lithostathine, inhibitor of stone formation [56438] (1 species)
  15. 3001458Low affinity immunoglobulin epsilon Fc receptor [143957] (1 species)
  16. 3001513Macrophage mannose receptor, CRD4 [56444] (1 species)
  17. 3001519Mannose-binding protein A, C-lectin domain [56458] (2 species)
    1. 3001520Species Human (Homo sapiens) [TaxId:9606] [56459] (1 PDB entry)
    2. 3001522Species Norway rat (Rattus norvegicus) [TaxId:10116] [56460] (38 PDB entries)
  18. 3001624NK cell receptor [56452] (3 species)
    1. 3001625Species Mouse (Mus musculus), ly49-a [TaxId:10090] [56453] (1 PDB entry)
    2. Species Mouse (Mus musculus), ly49-c [TaxId:10090] [103351] (2 PDB entries)
    3. 3001631Species Mouse (Mus musculus), ly49-i [TaxId:10090] [75582] (1 PDB entry)
  19. 3001634NK cell-activating receptor nkg2d [64453] (2 species)
    1. 3001635Species Human (Homo sapiens) [TaxId:9606] [64455] (4 PDB entries)
    2. 3001643Species Mouse (Mus musculus) [TaxId:10090] [64454] (2 PDB entries)
  20. 3001647Ovocleidin-17 [90059] (1 species)
    major protein of the eggshell calcified layer
  21. 3001650Oxidised low density lipoprotein [143955] (1 species)
  22. 3001653P-selectin, C-lectin domain [116731] (1 species)
    followed by EGF-like module
  23. 3001665Pancreatitis-associated protein 1 [103341] (1 species)
  24. 3001668Snake coagglutinin alpha chain [88861] (10 species)
    heterodimeric coagulation factors IX/X-binding protein (IX/X-BP)
    1. 3001669Species Habu snake (Trimeresurus flavoviridis) [TaxId:88087] [88862] (6 PDB entries)
    2. 3001679Species Habu snake (Trimeresurus flavoviridis), flavocetin-A [TaxId:88087] [88863] (1 PDB entry)
    3. 3001681Species Hundred-pace snake (Deinagkistrodon acutus), different isoforms [TaxId:36307] [88865] (3 PDB entries)
    4. 3001685Species Jararaca (Bothrops jararaca), botrocetin [TaxId:8724] [88864] (4 PDB entries)
    5. 3001691Species Malayan pit viper (Calloselasma rhodostoma), rhodocetin [TaxId:8717] [143953] (1 PDB entry)
      Uniprot P81397 1-132
    6. 3001693Species Puff adder (Bitis arietans), bitiscetin [TaxId:8692] [88866] (2 PDB entries)
    7. 3001696Species Saw-scaled viper (Echis carinatus), echicetin [TaxId:40353] [103346] (1 PDB entry)
    8. 3001698Species Snake (Echis multisquamatus), Ems16 [TaxId:93050] [103343] (2 PDB entries)
      Uniprot Q7T2Q1 24-157
    9. 3001701Species South american rattlesnake (Crotalus durissus terrificus), convulxin [TaxId:8732] [103344] (2 PDB entries)
    10. 3001706Species Taiwan habu (Trimeresurus mucrosquamatus), mucrocetin [TaxId:103944] [103345] (1 PDB entry)
  25. 3001710Snake coagglutinin beta chain [88867] (10 species)
    heterodimeric coagulation factors IX/X-binding protein (IX/X-BP)
    1. 3001711Species Habu snake (Trimeresurus flavoviridis) [TaxId:88087] [88868] (6 PDB entries)
    2. 3001721Species Habu snake (Trimeresurus flavoviridis), flavocetin-A [TaxId:88087] [88869] (1 PDB entry)
    3. 3001723Species Jararaca (Bothrops jararaca), botrocetin [TaxId:8724] [88870] (4 PDB entries)
    4. 3001729Species Malayan pit viper (Calloselasma rhodostoma), rhodocetin [TaxId:8717] [143954] (1 PDB entry)
      Uniprot P81398 2-128
    5. 3001731Species Puff adder (Bitis arietans), bitiscetin [TaxId:8692] [88872] (2 PDB entries)
    6. 3001734Species Saw-scaled viper (Echis carinatus), echicetin [TaxId:40353] [103350] (1 PDB entry)
    7. 3001736Species Sharp-nosed viper (Deinagkistrodon acutus) [TaxId:36307] [88871] (3 PDB entries)
    8. 3001740Species Snake (Echis multisquamatus), Ems16 [TaxId:93050] [103347] (2 PDB entries)
      Uniprot Q7T2Q0 27-153
    9. 3001743Species South american rattlesnake (Crotalus durissus terrificus), convulxin [TaxId:8732] [103348] (2 PDB entries)
    10. 3001748Species Taiwan habu (Trimeresurus mucrosquamatus), mucrocetin [TaxId:103944] [103349] (1 PDB entry)
  26. 3001752Surfactant protein, lectin domain [56461] (3 species)
    1. 3001753Species Human (Homo sapiens), SP-D [TaxId:9606] [56462] (11 PDB entries)
    2. 3001787Species Norway rat (Rattus norvegicus), SP-A [TaxId:10116] [103352] (15 PDB entries)
    3. 3001803Species Pig (Sus scrofa) [TaxId:9823] [226409] (3 PDB entries)
  27. 3001807Tetranectin [56465] (1 species)
    trimeric plasminogen binding protein with an alpha-helical coiled coil
  28. 3001812Type II antifreeze protein [56450] (1 species)
  29. 3001815automated matches [190329] (10 species)
    not a true protein
    1. 3001816Species Agkistrodon rhodostoma [TaxId:8717] [188575] (1 PDB entry)
    2. 3001821Species Brachyopsis rostratus [TaxId:412977] [188571] (1 PDB entry)
    3. 3001823Species Cow (Bos taurus) [TaxId:9913] [374004] (7 PDB entries)
    4. 3001831Species Cucumaria echinata [TaxId:40245] [271988] (1 PDB entry)
    5. 3001836Species Human (Homo sapiens) [TaxId:9606] [187151] (9 PDB entries)
    6. 3001864Species Human herpesvirus 4 (strain b95-8) [TaxId:10377] [255828] (1 PDB entry)
    7. 3001867Species Jararacussu (Bothrops jararacussu) [TaxId:8726] [326863] (1 PDB entry)
    8. 3001878Species Malayan pit viper (Calloselasma rhodostoma) [TaxId:8717] [188489] (10 PDB entries)
    9. 3001984Species Mouse (Mus musculus) [TaxId:10090] [187300] (3 PDB entries)
    10. 3001990Species Sharp-nosed viper (Deinagkistrodon acutus) [TaxId:36307] [195597] (1 PDB entry)

More info for Family d.169.1.1: C-type lectin domain

Timeline for Family d.169.1.1: C-type lectin domain: