Class d: Alpha and beta proteins (a+b) [53931] (376 folds) |
Fold d.142: ATP-grasp [56058] (2 superfamilies) Consists of two subdomains with different alpha+beta folds shares functional and structural similarities with the PIPK and protein kinase superfamilies |
Superfamily d.142.2: DNA ligase/mRNA capping enzyme, catalytic domain [56091] (5 families) has a circularly permuted topology |
Family d.142.2.2: Adenylation domain of NAD+-dependent DNA ligase [56096] (2 proteins) automatically mapped to Pfam PF01653 |
Protein Adenylation domain of NAD+-dependent DNA ligase [56097] (4 species) contains additional, N-terminal all-alpha subdomain |
Species Thermus filiformis [TaxId:276] [56099] (2 PDB entries) |
Domain d1dgsa3: 1dgs A:1-314 [41581] Other proteins in same PDB: d1dgsa1, d1dgsa2, d1dgsb1, d1dgsb2 protein/DNA complex; complexed with amp, zn |
Domain d1dgsb3: 1dgs B:2001-2314 [41582] Other proteins in same PDB: d1dgsa1, d1dgsa2, d1dgsb1, d1dgsb2 protein/DNA complex; complexed with amp, zn |
Domain d1v9pa3: 1v9p A:1-317 [100546] Other proteins in same PDB: d1v9pa1, d1v9pa2, d1v9pb1, d1v9pb2 complexed with amp, zn |
Domain d1v9pb3: 1v9p B:2001-2317 [100549] Other proteins in same PDB: d1v9pa1, d1v9pa2, d1v9pb1, d1v9pb2 complexed with amp, zn |
Timeline for Species Thermus filiformis [TaxId:276] from d.142.2.2 Adenylation domain of NAD+-dependent DNA ligase: