SCOP 1.73: Protein: Adenylation domain of NAD+-dependent DNA ligase

Root: SCOP 1.73
Class d: Alpha and beta proteins (a+b) [53931] (334 folds)
Fold d.142: ATP-grasp [56058] (2 superfamilies)
Consists of two subdomains with different alpha+beta folds
shares functional and structural similarities with the PIPK and protein kinase superfamilies
Superfamily d.142.2: DNA ligase/mRNA capping enzyme, catalytic domain [56091] (4 families)
has a circularly permuted topology
Family d.142.2.2: Adenylation domain of NAD+-dependent DNA ligase [56096] (1 protein)
Protein Adenylation domain of NAD+-dependent DNA ligase [56097] (3 species)
contains additional, N-terminal all-alpha subdomain

Bacillus stearothermophilus [TaxId:1422] [56098] (1 PDB entry)
- Domains for 1b04:
  1. Domain d1b04a_: 1b04 A: [41579]
  2. Domain d1b04b_: 1b04 B: [41580]
Enterococcus faecalis [TaxId:1351] [118124] (2 PDB entries)
1. Domain for 1ta8:
  - Domain d1ta8a_: 1ta8 A: [112375]
    complexed with gol, nmn, so4
2. Domains for 1tae:
  1. Domain d1taea_: 1tae A: [112376]
  2. Domain d1taeb_: 1tae B: [112377]
  3. Domain d1taec_: 1tae C: [112378]
  4. Domain d1taed_: 1tae D: [112379]
    complexed with na, nad, so4
Thermus filiformis [TaxId:276] [56099] (2 PDB entries)
1. Domains for 1dgs:
  1. Domain d1dgsa3: 1dgs A:1-314 [41581]
    Other proteins in same PDB: d1dgsa1, d1dgsa2, d1dgsb1, d1dgsb2
  2. Domain d1dgsb3: 1dgs B:2001-2314 [41582]
    Other proteins in same PDB: d1dgsa1, d1dgsa2, d1dgsb1, d1dgsb2
    complexed with amp, zn
2. Domains for 1v9p:
  1. Domain d1v9pa3: 1v9p A:1-317 [100546]
    Other proteins in same PDB: d1v9pa1, d1v9pa2, d1v9pb1, d1v9pb2
  2. Domain d1v9pb3: 1v9p B:2001-2317 [100549]
    Other proteins in same PDB: d1v9pa1, d1v9pa2, d1v9pb1, d1v9pb2
    complexed with amp, zn

Timeline for Protein Adenylation domain of NAD+-dependent DNA ligase from d.142.2.2: Adenylation domain of NAD+-dependent DNA ligase:

Protein Adenylation domain of NAD+-dependent DNA ligase from d.142.2.2: Adenylation domain of NAD+-dependent DNA ligase first appeared (with stable ids) in SCOP 1.55
Protein Adenylation domain of NAD+-dependent DNA ligase from d.142.2.2: Adenylation domain of NAD+-dependent DNA ligase appears in SCOP 1.71
Protein Adenylation domain of NAD+-dependent DNA ligase from d.142.2.2: Adenylation domain of NAD+-dependent DNA ligase appears in SCOP 1.75
Protein Adenylation domain of NAD+-dependent DNA ligase from d.142.2.2: Adenylation domain of NAD+-dependent DNA ligase appears in the current release, SCOPe 2.08