SCOPe 2.06: Species: Chlorella virus PBCV-1 [TaxId: 10506]

Root: SCOPe 2.06
Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
Fold d.142: ATP-grasp [56058] (2 superfamilies)
Consists of two subdomains with different alpha+beta folds
shares functional and structural similarities with the PIPK and protein kinase superfamilies
Superfamily d.142.2: DNA ligase/mRNA capping enzyme, catalytic domain [56091] (6 families)
has a circularly permuted topology
Family d.142.2.1: ATP-dependent DNA ligase catalytic domain [56092] (2 proteins)
automatically mapped to Pfam PF01068
Protein ATP-dependent DNA ligase, N-terminal domain [56093] (2 species)
Species Chlorella virus PBCV-1 [TaxId:10506] [56095] (4 PDB entries)

Domain(s) for 1fvi:
- Domain d1fvia2: 1fvi A:2-189 [41578]
  Other proteins in same PDB: d1fvia1
  complexed with amp, so4
Domain(s) for 1p8l:
- Domain d1p8la2: 1p8l A:2-189 [94364]
  Other proteins in same PDB: d1p8la1
  complexed with amp
Domain(s) for 2q2t:
- Domain d2q2ta2: 2q2t A:2-189 [150015]
  Other proteins in same PDB: d2q2ta1
  automatically matched to d1p8la2
  protein/DNA complex; complexed with amp
Domain(s) for 2q2u:
1. Domain d2q2ua2: 2q2u A:2-189 [150017]
  Other proteins in same PDB: d2q2ua1, d2q2ub1, d2q2uc1, d2q2ud1
  automatically matched to d1p8la2
  protein/DNA complex
2. Domain d2q2ub2: 2q2u B:2-189 [150019]
  Other proteins in same PDB: d2q2ua1, d2q2ub1, d2q2uc1, d2q2ud1
  automatically matched to d1p8la2
  protein/DNA complex
3. Domain d2q2uc2: 2q2u C:2-189 [150021]
  Other proteins in same PDB: d2q2ua1, d2q2ub1, d2q2uc1, d2q2ud1
  automatically matched to d1p8la2
  protein/DNA complex
4. Domain d2q2ud2: 2q2u D:2-189 [150023]
  Other proteins in same PDB: d2q2ua1, d2q2ub1, d2q2uc1, d2q2ud1
  automatically matched to d1p8la2
  protein/DNA complex

Timeline for Species Chlorella virus PBCV-1 [TaxId:10506] from d.142.2.1 ATP-dependent DNA ligase, N-terminal domain:

Species Chlorella virus PBCV-1 [TaxId:10506] from d.142.2.1 ATP-dependent DNA ligase, N-terminal domain first appeared (with stable ids) in SCOP 1.55, called Species Chlorella virus, PBCV-1 from d.142.2.1 ATP-dependent DNA ligase, N-terminal domain
Species Chlorella virus PBCV-1 [TaxId:10506] from d.142.2.1 ATP-dependent DNA ligase, N-terminal domain appears in SCOPe 2.05
Species Chlorella virus PBCV-1 [TaxId:10506] from d.142.2.1 ATP-dependent DNA ligase, N-terminal domain appears in SCOPe 2.07
Species Chlorella virus PBCV-1 [TaxId:10506] from d.142.2.1 ATP-dependent DNA ligase, N-terminal domain appears in the current release, SCOPe 2.08