SCOPe 2.05: Protein: ATP-dependent DNA ligase, N-terminal domain

Root: SCOPe 2.05
Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
Fold d.142: ATP-grasp [56058] (2 superfamilies)
Consists of two subdomains with different alpha+beta folds
shares functional and structural similarities with the PIPK and protein kinase superfamilies
Superfamily d.142.2: DNA ligase/mRNA capping enzyme, catalytic domain [56091] (6 families)
has a circularly permuted topology
Family d.142.2.1: ATP-dependent DNA ligase catalytic domain [56092] (2 proteins)
automatically mapped to Pfam PF01068
Protein ATP-dependent DNA ligase, N-terminal domain [56093] (2 species)

Bacteriophage T7 [TaxId:10760] [56094] (1 PDB entry)
- Domain for 1a0i:
  - Domain d1a0ia2: 1a0i A:2-240 [41577]
    Other proteins in same PDB: d1a0ia1
    protein/DNA complex; complexed with atp
Chlorella virus PBCV-1 [TaxId:10506] [56095] (4 PDB entries)
1. Domain for 1fvi:
  - Domain d1fvia2: 1fvi A:2-189 [41578]
    Other proteins in same PDB: d1fvia1
    complexed with amp, so4
2. Domain for 1p8l:
  - Domain d1p8la2: 1p8l A:2-189 [94364]
    Other proteins in same PDB: d1p8la1
    complexed with amp
3. Domain for 2q2t:
  - Domain d2q2ta2: 2q2t A:2-189 [150015]
    Other proteins in same PDB: d2q2ta1
    automatically matched to d1p8la2
    protein/DNA complex; complexed with amp
4. Domains for 2q2u:
  1. Domain d2q2ua2: 2q2u A:2-189 [150017]
    Other proteins in same PDB: d2q2ua1, d2q2ub1, d2q2uc1, d2q2ud1
    automatically matched to d1p8la2
    protein/DNA complex
  2. Domain d2q2ub2: 2q2u B:2-189 [150019]
    Other proteins in same PDB: d2q2ua1, d2q2ub1, d2q2uc1, d2q2ud1
    automatically matched to d1p8la2
    protein/DNA complex
  3. Domain d2q2uc2: 2q2u C:2-189 [150021]
    Other proteins in same PDB: d2q2ua1, d2q2ub1, d2q2uc1, d2q2ud1
    automatically matched to d1p8la2
    protein/DNA complex
  4. Domain d2q2ud2: 2q2u D:2-189 [150023]
    Other proteins in same PDB: d2q2ua1, d2q2ub1, d2q2uc1, d2q2ud1
    automatically matched to d1p8la2
    protein/DNA complex

Timeline for Protein ATP-dependent DNA ligase, N-terminal domain from d.142.2.1: ATP-dependent DNA ligase catalytic domain:

Protein ATP-dependent DNA ligase, N-terminal domain from d.142.2.1: ATP-dependent DNA ligase catalytic domain first appeared (with stable ids) in SCOP 1.55, called Protein ATP-dependent DNA ligase, N-terminal domain from d.142.2.1: ATP-dependent DNA ligase, N-terminal domain
Protein ATP-dependent DNA ligase, N-terminal domain from d.142.2.1: ATP-dependent DNA ligase catalytic domain appears in SCOPe 2.04
Protein ATP-dependent DNA ligase, N-terminal domain from d.142.2.1: ATP-dependent DNA ligase catalytic domain appears in SCOPe 2.06
Protein ATP-dependent DNA ligase, N-terminal domain from d.142.2.1: ATP-dependent DNA ligase catalytic domain appears in the current release, SCOPe 2.08