SCOPe 2.04: Family d.142.2.1: ATP-dependent DNA ligase catalytic domain

Lineage for Family d.142.2.1: ATP-dependent DNA ligase catalytic domain

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.142: ATP-grasp [56058] (2 superfamilies)
   Consists of two subdomains with different alpha+beta folds
   shares functional and structural similarities with the PIPK and protein kinase superfamilies

4. Superfamily d.142.2: DNA ligase/mRNA capping enzyme, catalytic domain [56091] (6 families)
   has a circularly permuted topology

5. Family d.142.2.1: ATP-dependent DNA ligase catalytic domain [56092] (2 proteins)
   automatically mapped to Pfam PF01068

Proteins:

1. ATP-dependent DNA ligase, N-terminal domain [56093] (2 species)

   1. Species Bacteriophage T7 [TaxId:10760] [56094] (1 PDB entry)

   2. Species Chlorella virus PBCV-1 [TaxId:10506] [56095] (4 PDB entries)

2. DNA ligase I (LIG1) [118122] (1 species)

   • Species Human (Homo sapiens) [TaxId:9606] [118123] (1 PDB entry)
     Uniprot P18858 262-901

More info for Family d.142.2.1: ATP-dependent DNA ligase catalytic domain

Timeline for Family d.142.2.1: ATP-dependent DNA ligase catalytic domain:

• Family d.142.2.1: ATP-dependent DNA ligase catalytic domain first appeared (with stable ids) in SCOP 1.55, called Family d.142.2.1: ATP-dependent DNA ligase, N-terminal domain
  
• Family d.142.2.1: ATP-dependent DNA ligase catalytic domain appears in SCOPe 2.03
  
• Family d.142.2.1: ATP-dependent DNA ligase catalytic domain appears in SCOPe 2.05
  
• Family d.142.2.1: ATP-dependent DNA ligase catalytic domain appears in the current release, SCOPe 2.08