SCOPe 2.06: Family d.142.1.2: BC ATP-binding domain-like

Lineage for Family d.142.1.2: BC ATP-binding domain-like

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.142: ATP-grasp [56058] (2 superfamilies)
   Consists of two subdomains with different alpha+beta folds
   shares functional and structural similarities with the PIPK and protein kinase superfamilies

4. Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (11 families)

5. Family d.142.1.2: BC ATP-binding domain-like [56067] (7 proteins)

Proteins:

1. Acetyl-CoA carboxylase, BC-M subdomain [118120] (1 species)

   • Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [118121] (2 PDB entries)
     Uniprot Q00955 13-566

2. Biotin carboxylase (BC), domain 2 [56068] (2 species)
   subunit of acetyl-CoA and pyruvate carboxylases

   1. Species Aquifex aeolicus [TaxId:63363] [103284] (1 PDB entry)

   2. Species Escherichia coli [TaxId:562] [56069] (24 PDB entries)

3. Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains [56076] (1 species)
   duplication: CPS large subunit contains two full BC-like lobes: carboxyphosphate and carbamoyl phosphate domains

   • Species Escherichia coli [TaxId:562] [56077] (10 PDB entries)
     Uniprot P00968

4. Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 [56070] (2 species)

   1. Species Escherichia coli [TaxId:562] [56071] (1 PDB entry)

   2. Species Thermotoga maritima [TaxId:2336] [111187] (1 PDB entry)
      Uniprot Q9X0X7

5. Glycinamide ribonucleotide transformylase PurT, domain 2 [56074] (1 species)

   • Species Escherichia coli [TaxId:562] [56075] (7 PDB entries)

6. N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), domain 2 [56072] (1 species)

   • Species Escherichia coli [TaxId:562] [56073] (4 PDB entries)

7. automated matches [254674] (2 species)
   not a true protein

   1. Species Escherichia coli K-12 [TaxId:83333] [255842] (2 PDB entries)

   2. Species Yersinia pestis [TaxId:214092] [255970] (1 PDB entry)

More info for Family d.142.1.2: BC ATP-binding domain-like

Timeline for Family d.142.1.2: BC ATP-binding domain-like:

• Family d.142.1.2: BC ATP-binding domain-like first appeared (with stable ids) in SCOP 1.55, called Family d.142.1.2: Biotin carboxylase/Carbamoyl phosphate synthetase
  
• Family d.142.1.2: BC ATP-binding domain-like appears in SCOPe 2.05
  
• Family d.142.1.2: BC ATP-binding domain-like appears in SCOPe 2.07
  
• Family d.142.1.2: BC ATP-binding domain-like appears in the current release, SCOPe 2.08