Lineage for Family d.131.1.2: DNA polymerase processivity factor

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2539893Fold d.131: DNA clamp [55978] (1 superfamily)
    contains two helices and two beta sheets
    duplication: fold has internal pseudo two-fold symmetry
  4. 2539894Superfamily d.131.1: DNA clamp [55979] (3 families) (S)
  5. 2540079Family d.131.1.2: DNA polymerase processivity factor [55983] (5 protein domains)
    duplication: consists of two domains of this fold

Protein Domains:

  1. 2540080gp45 sliding clamp [55984] (2 species)
    1. 2540081Species Bacteriophage RB69 [TaxId:12353] [55985] (2 PDB entries)
    2. 2540094Species Bacteriophage T4 [TaxId:10665] [55986] (1 PDB entry)
  2. 2540101Proliferating cell nuclear antigen (PCNA) [55989] (8 species)
    1. 2540102Species Archaeoglobus fulgidus [TaxId:2234] [103254] (3 PDB entries)
    2. 2540109Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [55990] (6 PDB entries)
      Uniprot P15873
    3. 2540130Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [270905] (7 PDB entries)
    4. 2540137Species Haloferax volcanii [TaxId:2246] [225733] (1 PDB entry)
    5. 2540144Species Human (Homo sapiens) [TaxId:9606] [55991] (9 PDB entries)
      Uniprot P12004
    6. 2540195Species Pyrococcus furiosus [TaxId:186497] [316219] (1 PDB entry)
    7. 2540198Species Pyrococcus furiosus [TaxId:2261] [55992] (5 PDB entries)
    8. 2540211Species Sulfolobus tokodaii [TaxId:111955] [111175] (1 PDB entry)
      Uniprot Q975N2
  3. 2540220UL42 [55987] (1 species)
  4. 2540230UL44 [111176] (2 species)
    1. 2540231Species Human cytomegalovirus (strain ad169) [TaxId:10360] [326638] (2 PDB entries)
    2. 2540238Species Human cytomegalovirus, HHV-5 [TaxId:10359] [111177] (2 PDB entries)
      Uniprot P16790 1-290
  5. 2540243automated matches [227006] (3 species)
    not a true protein
    1. 2540244Species Archaeoglobus fulgidus [TaxId:2234] [256015] (1 PDB entry)
    2. 2540251Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [232312] (4 PDB entries)
    3. 2540258Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [233826] (5 PDB entries)

More info for Family d.131.1.2: DNA polymerase processivity factor

Timeline for Family d.131.1.2: DNA polymerase processivity factor: