Lineage for Protein: Naphthalene 1,2-dioxygenase alpha subunit, C-domain

  1. Root: SCOP 1.73
  2. 713694Class d: Alpha and beta proteins (a+b) [53931] (334 folds)
  3. 733278Fold d.129: TBP-like [55944] (10 superfamilies)
    beta-alpha-beta(4)-alpha
  4. 733462Superfamily d.129.3: Bet v1-like [55961] (7 families) (S)
    contains a single copy of this fold with a alpha-beta2 insertion after the first helix; there is a cavity between the beta-sheet and the long C-terminal helix
  5. 733518Family d.129.3.3: Ring hydroxylating alpha subunit catalytic domain [55969] (6 proteins)
    Pfam PF00848; contains a few insertion and C-terminal extension compared with Bet v1
  6. 733533Protein Naphthalene 1,2-dioxygenase alpha subunit, C-domain [55970] (2 species)

Species:

  1. 733534Pseudomonas putida [TaxId:303] [55971] (16 PDB entries)
    1. Domain for 1eg9:
    2. Domains for 1ndo:
      1. 733550Domain d1ndoa2: 1ndo A:155-447 [41323]
        Other proteins in same PDB: d1ndoa1, d1ndob_, d1ndoc1, d1ndod_, d1ndoe1, d1ndof_
      2. 733551Domain d1ndoc2: 1ndo C:155-447 [41324]
        Other proteins in same PDB: d1ndoa1, d1ndob_, d1ndoc1, d1ndod_, d1ndoe1, d1ndof_
      3. 733552Domain d1ndoe2: 1ndo E:155-445 [41325]
        Other proteins in same PDB: d1ndoa1, d1ndob_, d1ndoc1, d1ndod_, d1ndoe1, d1ndof_
        complexed with fe, fes
    3. Domain for 1o7g:
    4. Domain for 1o7h:
    5. Domain for 1o7m:
    6. Domain for 1o7n:
    7. Domain for 1o7p:
    8. Domain for 1o7w:
    9. Domain for 1uuv:
    10. Domain for 1uuw:
    11. Domain for 2hmj:
    12. Domain for 2hmk:
    13. Domain for 2hml:
    14. Domain for 2hmm:
    15. Domain for 2hmn:
    16. Domain for 2hmo:
  2. 733553Rhodococcus sp. ncimb12038 [TaxId:92694] [143822] (2 PDB entries)
    1. Domains for 2b1x:
      1. 733554Domain d2b1xa2: 2b1x A:163-441 [127676]
        Other proteins in same PDB: d2b1xa1, d2b1xb1, d2b1xc1, d2b1xd1, d2b1xe1, d2b1xf1
        complexed with fe, fes, mpd
      2. 733555Domain d2b1xc2: 2b1x C:163-441 [127679]
        Other proteins in same PDB: d2b1xa1, d2b1xb1, d2b1xc1, d2b1xd1, d2b1xe1, d2b1xf1
        automatically matched to 2B1X A:163-441
        complexed with fe, fes, mpd
      3. 733556Domain d2b1xe2: 2b1x E:163-441 [127682]
        Other proteins in same PDB: d2b1xa1, d2b1xb1, d2b1xc1, d2b1xd1, d2b1xe1, d2b1xf1
        automatically matched to 2B1X A:163-441
        complexed with fe, fes, mpd
    2. Domains for 2b24:
      1. 733557Domain d2b24a2: 2b24 A:163-440 [127691]
        Other proteins in same PDB: d2b24a1, d2b24b1, d2b24c1, d2b24d1, d2b24e1, d2b24f1
        automatically matched to 2B1X A:163-441
        complexed with fe, fes, ind
      2. 733558Domain d2b24c2: 2b24 C:163-440 [127694]
        Other proteins in same PDB: d2b24a1, d2b24b1, d2b24c1, d2b24d1, d2b24e1, d2b24f1
        automatically matched to 2B1X A:163-441
        complexed with fe, fes, ind
      3. 733559Domain d2b24e2: 2b24 E:163-440 [127697]
        Other proteins in same PDB: d2b24a1, d2b24b1, d2b24c1, d2b24d1, d2b24e1, d2b24f1
        automatically matched to 2B1X A:163-441
        complexed with fe, fes, ind

More info for Protein Naphthalene 1,2-dioxygenase alpha subunit, C-domain from d.129.3.3: Ring hydroxylating alpha subunit catalytic domain

Timeline for Protein Naphthalene 1,2-dioxygenase alpha subunit, C-domain from d.129.3.3: Ring hydroxylating alpha subunit catalytic domain: