SCOP 1.71: Protein: Naphthalene 1,2-dioxygenase alpha subunit, C-domain

Lineage for Protein: Naphthalene 1,2-dioxygenase alpha subunit, C-domain

Root: SCOP 1.71
Class d: Alpha and beta proteins (a+b) [53931] (286 folds)
Fold d.129: TBP-like [55944] (9 superfamilies)
beta-alpha-beta(4)-alpha

Superfamily d.129.3: Bet v1-like [55961] (6 families)

contains a single copy of this fold with a alpha-beta2 insertion after the first helix; there is a cavity between the beta-sheet and the long C-terminal helix

Family d.129.3.3: Ring hydroxylating alpha subunit catalytic domain [55969] (2 proteins)
Pfam 00848; contains a few insertion and C-terminal extension compared with Bet v1
Protein Naphthalene 1,2-dioxygenase alpha subunit, C-domain [55970] (1 species)

Species:

Pseudomonas putida [TaxId:303] [55971] (8 PDB entries)
1. Domain for 1eg9:
  - Domain d1eg9a2: 1eg9 A:155-447 [41322]
    Other proteins in same PDB: d1eg9a1, d1eg9b_
    complexed with fes, ind, of1, so4
2. Domains for 1ndo:
  1. Domain d1ndoa2: 1ndo A:155-447 [41323]
    Other proteins in same PDB: d1ndoa1, d1ndob_, d1ndoc1, d1ndod_, d1ndoe1, d1ndof_
  2. Domain d1ndoc2: 1ndo C:155-447 [41324]
    Other proteins in same PDB: d1ndoa1, d1ndob_, d1ndoc1, d1ndod_, d1ndoe1, d1ndof_
  3. Domain d1ndoe2: 1ndo E:155-445 [41325]
    Other proteins in same PDB: d1ndoa1, d1ndob_, d1ndoc1, d1ndod_, d1ndoe1, d1ndof_
    complexed with fe, fes
3. Domain for 1o7g:
  - Domain d1o7ga2: 1o7g A:155-448 [81135]
    Other proteins in same PDB: d1o7ga1, d1o7gb_
    complexed with edo, fe, fes, npy, so4
4. Domain for 1o7h:
  - Domain d1o7ha2: 1o7h A:155-448 [81138]
    Other proteins in same PDB: d1o7ha1, d1o7hb_
    complexed with edo, fe, fes, so4
5. Domain for 1o7m:
  - Domain d1o7ma2: 1o7m A:155-448 [81160]
    Other proteins in same PDB: d1o7ma1, d1o7mb_
    complexed with edo, fe, fes, oxy, so4
6. Domain for 1o7n:
  - Domain d1o7na2: 1o7n A:155-448 [81163]
    Other proteins in same PDB: d1o7na1, d1o7nb_
    complexed with edo, fe, fes, ind, oxy, so4
7. Domain for 1o7p:
  - Domain d1o7pa2: 1o7p A:155-447 [81166]
    Other proteins in same PDB: d1o7pa1, d1o7pb_
    complexed with edo, fe, fes, ndh, so4
8. Domain for 1o7w:
  - Domain d1o7wa2: 1o7w A:155-447 [81169]
    Other proteins in same PDB: d1o7wa1, d1o7wb_
    complexed with edo, fe, fes, so4

More info for Protein Naphthalene 1,2-dioxygenase alpha subunit, C-domain from d.129.3.3: Ring hydroxylating alpha subunit catalytic domain

Timeline for Protein Naphthalene 1,2-dioxygenase alpha subunit, C-domain from d.129.3.3: Ring hydroxylating alpha subunit catalytic domain:

Protein Naphthalene 1,2-dioxygenase alpha subunit, C-domain from d.129.3.3: Ring hydroxylating alpha subunit catalytic domain first appeared (with stable ids) in SCOP 1.55, called Protein Naphthalene 1,2-dioxygenase alpha subunit, C-domain from d.129.3.3: Naphthalene 1,2-dioxygenase alpha subunit, C-domain
Protein Naphthalene 1,2-dioxygenase alpha subunit, C-domain from d.129.3.3: Ring hydroxylating alpha subunit catalytic domain was called Protein Naphthalene 1,2-dioxygenase alpha subunit, C-domain from d.129.3.3: Ring hydroxylating alpha subunit catalytic domain (Pfam 00848) in SCOP 1.69
Protein Naphthalene 1,2-dioxygenase alpha subunit, C-domain from d.129.3.3: Ring hydroxylating alpha subunit catalytic domain appears in SCOP 1.73
Protein Naphthalene 1,2-dioxygenase alpha subunit, C-domain from d.129.3.3: Ring hydroxylating alpha subunit catalytic domain appears in the current release, SCOPe 2.08