SCOP 1.71: Family d.129.3.3: Ring hydroxylating alpha subunit catalytic domain

Lineage for Family d.129.3.3: Ring hydroxylating alpha subunit catalytic domain

1. Root: SCOP 1.71

2. Class d: Alpha and beta proteins (a+b) [53931] (286 folds)

3. Fold d.129: TBP-like [55944] (9 superfamilies)
   beta-alpha-beta(4)-alpha

4. Superfamily d.129.3: Bet v1-like [55961] (6 families)
   contains a single copy of this fold with a alpha-beta2 insertion after the first helix; there is a cavity between the beta-sheet and the long C-terminal helix

5. Family d.129.3.3: Ring hydroxylating alpha subunit catalytic domain [55969] (2 proteins)
   Pfam 00848; contains a few insertion and C-terminal extension compared with Bet v1

Proteins:

1. Biphenyl dioxygenase large subunit BphA1, C-terminal domain [111166] (1 species)

   • Species Rhodococcus sp. strain RHA1 [TaxId:101510] [111167] (2 PDB entries)

2. Naphthalene 1,2-dioxygenase alpha subunit, C-domain [55970] (1 species)

   • Species Pseudomonas putida [TaxId:303] [55971] (8 PDB entries)

More info for Family d.129.3.3: Ring hydroxylating alpha subunit catalytic domain

Timeline for Family d.129.3.3: Ring hydroxylating alpha subunit catalytic domain:

• Family d.129.3.3: Ring hydroxylating alpha subunit catalytic domain first appeared (with stable ids) in SCOP 1.55, called Family d.129.3.3: Naphthalene 1,2-dioxygenase alpha subunit, C-domain
  
• Family d.129.3.3: Ring hydroxylating alpha subunit catalytic domain was called Family d.129.3.3: Ring hydroxylating alpha subunit catalytic domain (Pfam 00848) in SCOP 1.69
  
• Family d.129.3.3: Ring hydroxylating alpha subunit catalytic domain appears in SCOP 1.73
  
• Family d.129.3.3: Ring hydroxylating alpha subunit catalytic domain appears in the current release, SCOPe 2.08