Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2528985Fold d.92: Zincin-like [55485] (2 superfamilies)
    contains mixed beta sheet with connection over free side of the sheet
  4. 2528986Superfamily d.92.1: Metalloproteases ("zincins"), catalytic domain [55486] (18 families) (S)
  5. 2529558Family d.92.1.11: Matrix metalloproteases, catalytic domain [55528] (14 proteins)
  6. 2529559Protein Collagenase-3 (MMP-13) [55540] (2 species)
  7. 2529560Species Human (Homo sapiens) [TaxId:9606] [55541] (46 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 1eub:
  2. Domain(s) for 1fls:
  3. Domain(s) for 1fm1:
  4. Domain(s) for 1xuc:
    1. 2529567Domain d1xuca_: 1xuc A: [122332]
      automated match to d1euba_
      complexed with ca, pb3, zn
    2. 2529568Domain d1xucb_: 1xuc B: [122333]
      automated match to d1euba_
      complexed with ca, pb3, zn
  5. Domain(s) for 1xud:
    1. 2529571Domain d1xuda_: 1xud A: [122334]
      automated match to d1euba_
      complexed with ca, pb4, zn
    2. 2529572Domain d1xudb_: 1xud B: [122335]
      automated match to d1euba_
      complexed with ca, pb4, zn
  6. Domain(s) for 1xur:
    1. 2529575Domain d1xura_: 1xur A: [122338]
      automated match to d1euba_
      complexed with ca, pb5, zn
    2. 2529576Domain d1xurb_: 1xur B: [122339]
      automated match to d1euba_
      complexed with ca, pb5, zn
  7. Domain(s) for 1you:
    1. 2529617Domain d1youa_: 1you A: [123783]
      automated match to d1euba_
      complexed with ca, pfd, so4, zn
    2. 2529618Domain d1youb_: 1you B: [123784]
      automated match to d1euba_
      complexed with ca, pfd, so4, zn
  8. Domain(s) for 1ztq:
    1. 2529598Domain d1ztqa_: 1ztq A: [125651]
      automated match to d1euba_
      complexed with 033, ca, zn
    2. 2529599Domain d1ztqb_: 1ztq B: [125652]
      automated match to d1euba_
      complexed with 033, ca, zn
    3. 2529600Domain d1ztqc_: 1ztq C: [125653]
      automated match to d1euba_
      complexed with 033, ca, zn
    4. 2529601Domain d1ztqd_: 1ztq D: [125654]
      automated match to d1euba_
      complexed with 033, ca, zn
  9. Domain(s) for 2d1n:
    1. 2529619Domain d2d1na_: 2d1n A: [131132]
      automated match to d830cb_
      complexed with ca, fa4, zn
    2. 2529620Domain d2d1nb_: 2d1n B: [131133]
      automated match to d830cb_
      complexed with ca, fa4, zn
  10. Domain(s) for 2e2d:
  11. Domain(s) for 2ow9:
    1. 2529594Domain d2ow9a_: 2ow9 A: [139419]
      automated match to d830ca_
      complexed with ca, hae, so4, sp6, zn
    2. 2529595Domain d2ow9b_: 2ow9 B: [139420]
      automated match to d830ca_
      complexed with ca, hae, so4, sp6, zn
  12. Domain(s) for 2ozr:
    1. 2529649Domain d2ozra_: 2ozr A: [149119]
      automated match to d1euba_
      complexed with ca, gg1, hae, zn
    2. 2529650Domain d2ozrb_: 2ozr B: [149120]
      automated match to d1euba_
      complexed with ca, gg1, hae, zn
    3. 2529651Domain d2ozrc_: 2ozr C: [149121]
      automated match to d1euba_
      complexed with ca, gg1, hae, zn
    4. 2529652Domain d2ozrd_: 2ozr D: [149122]
      automated match to d1euba_
      complexed with ca, gg1, hae, zn
    5. 2529653Domain d2ozre_: 2ozr E: [149123]
      automated match to d1euba_
      complexed with ca, gg1, hae, zn
    6. 2529654Domain d2ozrf_: 2ozr F: [149124]
      automated match to d1euba_
      complexed with ca, gg1, hae, zn
    7. 2529655Domain d2ozrg_: 2ozr G: [149125]
      automated match to d1euba_
      complexed with ca, gg1, hae, zn
    8. 2529656Domain d2ozrh_: 2ozr H: [149126]
      automated match to d1euba_
      complexed with ca, gg1, hae, zn
  13. Domain(s) for 2pjt:
    1. 2529645Domain d2pjta_: 2pjt A: [149575]
      automated match to d1euba_
      complexed with 347, ca, zn
    2. 2529646Domain d2pjtb_: 2pjt B: [149576]
      automated match to d1euba_
      complexed with 347, ca, zn
    3. 2529647Domain d2pjtc_: 2pjt C: [149577]
      automated match to d1euba_
      complexed with 347, ca, zn
    4. 2529648Domain d2pjtd_: 2pjt D: [149578]
      automated match to d1euba_
      complexed with 347, ca, zn
  14. Domain(s) for 2yig:
    1. 2529592Domain d2yiga_: 2yig A: [170803]
      automated match to d1euba_
      complexed with 5el, ca, na, zn
    2. 2529593Domain d2yigb_: 2yig B: [170804]
      automated match to d1euba_
      complexed with 5el, ca, na, zn
  15. Domain(s) for 3elm:
    1. 2529609Domain d3elma_: 3elm A: [175062]
      automated match to d1euba_
      complexed with 24f, ca, zn
    2. 2529610Domain d3elmb_: 3elm B: [175063]
      automated match to d1euba_
      complexed with 24f, ca, zn
  16. Domain(s) for 3i7g:
    1. 2529581Domain d3i7ga_: 3i7g A: [178129]
      automated match to d1euba_
      complexed with 732, ca, fmt, zn
    2. 2529582Domain d3i7gb_: 3i7g B: [178130]
      automated match to d1euba_
      complexed with 732, ca, fmt, zn
  17. Domain(s) for 3i7i:
    1. 2529615Domain d3i7ia_: 3i7i A: [178131]
      automated match to d1euba_
      complexed with 518, ca, zn
    2. 2529616Domain d3i7ib_: 3i7i B: [178132]
      automated match to d1euba_
      complexed with 518, ca, zn
  18. Domain(s) for 3kec:
    1. 2529637Domain d3keca1: 3kec A:105-267 [179298]
      Other proteins in same PDB: d3keca2, d3keca3, d3kecb2, d3kecb3
      automated match to d1xuca1
      complexed with 3ke, ca, hae, so4, zn
    2. 2529638Domain d3kecb1: 3kec B:105-267 [179299]
      Other proteins in same PDB: d3keca2, d3keca3, d3kecb2, d3kecb3
      automated match to d1xuca1
      complexed with 3ke, ca, hae, so4, zn
  19. Domain(s) for 3kej:
    1. 2529602Domain d3keja_: 3kej A: [179306]
      automated match to d1xuca1
      complexed with 3ej, ca, zn
    2. 2529603Domain d3kejb_: 3kej B: [179307]
      automated match to d1xuca1
      complexed with 3ej, ca, zn
  20. Domain(s) for 3kek:
    1. 2529621Domain d3keka_: 3kek A: [179308]
      automated match to d1xuca1
      complexed with 3ek, ca, zn
    2. 2529622Domain d3kekb_: 3kek B: [179309]
      automated match to d1xuca1
      complexed with 3ek, ca, zn
  21. Domain(s) for 3kry:
    1. 2529611Domain d3krya_: 3kry A: [179632]
      automated match to d1youb1
      complexed with 3kr, ca, zn
    2. 2529612Domain d3kryb_: 3kry B: [179633]
      automated match to d1youb1
      complexed with 3kr, ca, zn
    3. 2529613Domain d3kryc_: 3kry C: [191748]
      automated match to d1euba_
      complexed with 3kr, ca, zn
    4. 2529614Domain d3kryd_: 3kry D: [179634]
      automated match to d1youb1
      complexed with 3kr, ca, zn
  22. Domain(s) for 3ljz:
    1. 2529625Domain d3ljza1: 3ljz A:105-267 [199732]
      Other proteins in same PDB: d3ljza2, d3ljzb2, d3ljzc2, d3ljzd2
      automated match to d3ljzd_
      complexed with ca, epe, la3, so4, zn
    2. 2529626Domain d3ljzb1: 3ljz B:105-267 [199733]
      Other proteins in same PDB: d3ljza2, d3ljzb2, d3ljzc2, d3ljzd2
      automated match to d3ljzd_
      complexed with ca, epe, la3, so4, zn
    3. 2529627Domain d3ljzc1: 3ljz C:105-267 [199734]
      Other proteins in same PDB: d3ljza2, d3ljzb2, d3ljzc2, d3ljzd2
      automated match to d3ljzd_
      complexed with ca, epe, la3, so4, zn
    4. 2529628Domain d3ljzd1: 3ljz D:105-267 [180331]
      Other proteins in same PDB: d3ljza2, d3ljzb2, d3ljzc2, d3ljzd2
      automated match to d1youb1
      complexed with ca, epe, la3, so4, zn
  23. Domain(s) for 3o2x:
    1. 2529577Domain d3o2xa1: 3o2x A:1105-1267 [199984]
      Other proteins in same PDB: d3o2xa2, d3o2xb2, d3o2xc2, d3o2xd2
      automated match to d3ljzd_
      complexed with 3o2, ca, epe, so4, zn
    2. 2529578Domain d3o2xb1: 3o2x B:2105-2267 [199985]
      Other proteins in same PDB: d3o2xa2, d3o2xb2, d3o2xc2, d3o2xd2
      automated match to d3ljzd_
      complexed with 3o2, ca, epe, so4, zn
    3. 2529579Domain d3o2xc1: 3o2x C:1105-1267 [199986]
      Other proteins in same PDB: d3o2xa2, d3o2xb2, d3o2xc2, d3o2xd2
      automated match to d3ljzd_
      complexed with 3o2, ca, epe, so4, zn
    4. 2529580Domain d3o2xd1: 3o2x D:2105-2267 [191905]
      Other proteins in same PDB: d3o2xa2, d3o2xb2, d3o2xc2, d3o2xd2
      automated match to d3ljzd_
      complexed with 3o2, ca, epe, so4, zn
  24. Domain(s) for 3tvc:
  25. Domain(s) for 3wv1:
    1. 2529629Domain d3wv1a_: 3wv1 A: [273013]
      automated match to d1euba_
      complexed with ca, fmt, na, whh, zn
    2. 2529630Domain d3wv1b_: 3wv1 B: [273012]
      automated match to d1euba_
      complexed with ca, fmt, na, whh, zn
  26. Domain(s) for 3wv2:
    1. 2529623Domain d3wv2a_: 3wv2 A: [260135]
      automated match to d1euba_
      complexed with ca, na, wgg, zn
    2. 2529624Domain d3wv2b_: 3wv2 B: [260136]
      automated match to d1euba_
      complexed with ca, na, wgg, zn
  27. Domain(s) for 3wv3:
    1. 2529585Domain d3wv3a_: 3wv3 A: [260128]
      automated match to d1euba_
      complexed with ca, edo, fmt, na, wll, zn
    2. 2529586Domain d3wv3b_: 3wv3 B: [260133]
      automated match to d1euba_
      complexed with ca, edo, fmt, na, wll, zn
  28. Domain(s) for 3zxh:
    1. 2529561Domain d3zxha_: 3zxh A: [186654]
      automated match to d1euba_
      complexed with ca, e41, gol, zn
    2. 2529562Domain d3zxhb_: 3zxh B: [186655]
      automated match to d1euba_
      complexed with ca, e41, gol, zn
  29. Domain(s) for 456c:
    1. 2529633Domain d456ca_: 456c A: [40402]
      complexed with ca, cbp, zn
    2. 2529634Domain d456cb_: 456c B: [40403]
      complexed with ca, cbp, zn
  30. Domain(s) for 4a7b:
    1. 2529596Domain d4a7ba_: 4a7b A: [186732]
      automated match to d1euba_
      complexed with 3w4, 3w5, ca, gol, hae, na, zn
    2. 2529597Domain d4a7bb_: 4a7b B: [186733]
      automated match to d1euba_
      complexed with 3w4, 3w5, ca, gol, hae, na, zn
  31. Domain(s) for 4fu4:
    1. 2529657Domain d4fu4a1: 4fu4 A:104-275 [266267]
      Other proteins in same PDB: d4fu4a2, d4fu4b2
      automated match to d3ba0a1
      complexed with ca, cl, edo, zn
    2. 2529658Domain d4fu4b1: 4fu4 B:104-275 [266269]
      Other proteins in same PDB: d4fu4a2, d4fu4b2
      automated match to d3ba0a1
      complexed with ca, cl, edo, zn
  32. Domain(s) for 4fvl:
    1. 2529639Domain d4fvla1: 4fvl A:104-275 [266271]
      Other proteins in same PDB: d4fvla2, d4fvlb2
      automated match to d3ba0a1
      complexed with ca, cl, gol, peg, pgo, zn
    2. 2529640Domain d4fvlb1: 4fvl B:104-275 [266273]
      Other proteins in same PDB: d4fvla2, d4fvlb2
      automated match to d3ba0a1
      complexed with ca, cl, gol, peg, pgo, zn
  33. Domain(s) for 4g0d:
    1. 2529641Domain d4g0da1: 4g0d A:104-275 [266287]
      Other proteins in same PDB: d4g0da2, d4g0db2, d4g0dc2, d4g0dd2
      automated match to d3ba0a1
      complexed with ca, cl, gol, peg, pgo, zn
    2. 2529642Domain d4g0db1: 4g0d B:104-275 [266289]
      Other proteins in same PDB: d4g0da2, d4g0db2, d4g0dc2, d4g0dd2
      automated match to d3ba0a1
      complexed with ca, cl, gol, peg, pgo, zn
    3. 2529643Domain d4g0dc1: 4g0d C:104-275 [266291]
      Other proteins in same PDB: d4g0da2, d4g0db2, d4g0dc2, d4g0dd2
      automated match to d3ba0a1
      complexed with ca, cl, gol, peg, pgo, zn
    4. 2529644Domain d4g0dd1: 4g0d D:104-275 [266293]
      Other proteins in same PDB: d4g0da2, d4g0db2, d4g0dc2, d4g0dd2
      automated match to d3ba0a1
      complexed with ca, cl, gol, peg, pgo, zn
  34. Domain(s) for 4jp4:
    1. 2529565Domain d4jp4a_: 4jp4 A: [237260]
      automated match to d1euba_
      complexed with az4, ca, na, zn
    2. 2529566Domain d4jp4b_: 4jp4 B: [237262]
      automated match to d1euba_
      complexed with az4, ca, na, zn
  35. Domain(s) for 4jpa:
    1. 2529631Domain d4jpaa_: 4jpa A: [237261]
      automated match to d1euba_
      complexed with az6, ca, na, zn
    2. 2529632Domain d4jpab_: 4jpa B: [237259]
      automated match to d1euba_
      complexed with az6, ca, na, zn
  36. Domain(s) for 4l19:
    1. 2529573Domain d4l19a_: 4l19 A: [261659]
      automated match to d1euba_
      complexed with 1ua, ca, fmt, gol, zn
    2. 2529574Domain d4l19b_: 4l19 B: [261658]
      automated match to d1euba_
      complexed with 1ua, ca, fmt, gol, zn
  37. Domain(s) for 5b5o:
    1. 2529563Domain d5b5oa_: 5b5o A: [328492]
      automated match to d1euba_
      complexed with ca, edo, na, wmm, zn
    2. 2529564Domain d5b5ob_: 5b5o B: [328544]
      automated match to d1euba_
      complexed with ca, edo, na, wmm, zn
  38. Domain(s) for 5b5p:
    1. 2529587Domain d5b5pa_: 5b5p A: [328533]
      automated match to d1euba_
      complexed with ca, wnn, zn
    2. 2529588Domain d5b5pb_: 5b5p B: [328445]
      automated match to d1euba_
      complexed with ca, wnn, zn
  39. Domain(s) for 5bot:
    1. 2529607Domain d5bota_: 5bot A: [273858]
      automated match to d1euba_
      complexed with 4um, ca, zn
    2. 2529608Domain d5botb_: 5bot B: [273861]
      automated match to d1euba_
      complexed with 4um, ca, zn
  40. Domain(s) for 5boy:
    1. 2529635Domain d5boya_: 5boy A: [273862]
      automated match to d1euba_
      complexed with 4ue, ca, zn
    2. 2529636Domain d5boyb_: 5boy B: [273864]
      automated match to d1euba_
      complexed with 4ue, ca, zn
  41. Domain(s) for 5bpa:
    1. 2529605Domain d5bpaa_: 5bpa A: [273863]
      automated match to d1euba_
      complexed with 4uf, ca, zn
    2. 2529606Domain d5bpab_: 5bpa B: [273859]
      automated match to d1euba_
      complexed with 4uf, ca, zn
  42. Domain(s) for 5uwk:
    1. 2529583Domain d5uwka_: 5uwk A: [336671]
      automated match to d1euba_
      complexed with 8om, ca, zn
    2. 2529584Domain d5uwkb_: 5uwk B: [336664]
      automated match to d1euba_
      complexed with 8om, ca, zn
  43. Domain(s) for 5uwl:
    1. 2529659Domain d5uwla_: 5uwl A: [336673]
      automated match to d1euba_
      complexed with 8oj, ca, zn
    2. 2529660Domain d5uwlb_: 5uwl B: [336668]
      automated match to d1euba_
      complexed with 8oj, ca, zn
  44. Domain(s) for 5uwm:
    1. 2529589Domain d5uwma_: 5uwm A: [336672]
      automated match to d1euba_
      complexed with 8oa, ca, zn
    2. 2529590Domain d5uwmb_: 5uwm B: [336663]
      automated match to d1euba_
      complexed with 8oa, ca, zn
  45. Domain(s) for 6hv2:
  46. Domain(s) for 830c:
    1. 2529569Domain d830ca_: 830c A: [40400]
      complexed with ca, rs1, zn
    2. 2529570Domain d830cb_: 830c B: [40401]
      complexed with ca, rs1, zn

More info for Species Human (Homo sapiens) [TaxId:9606] from d.92.1.11 Collagenase-3 (MMP-13)

Timeline for Species Human (Homo sapiens) [TaxId:9606] from d.92.1.11 Collagenase-3 (MMP-13):