Lineage for Protein: Collagenase-3 (MMP-13)

  1. Root: SCOPe 2.02
  2. 1190016Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1211973Fold d.92: Zincin-like [55485] (2 superfamilies)
    contains mixed beta sheet with connection over free side of the sheet
  4. 1211974Superfamily d.92.1: Metalloproteases ("zincins"), catalytic domain [55486] (18 families) (S)
  5. 1212397Family d.92.1.11: Matrix metalloproteases, catalytic domain [55528] (14 proteins)
  6. 1212398Protein Collagenase-3 (MMP-13) [55540] (2 species)

Species:

  1. 1212399Human (Homo sapiens) [TaxId:9606] [55541] (28 PDB entries)
    1. Domain for 1eub:
    2. Domain for 1fls:
    3. Domain for 1fm1:
    4. Domains for 1xuc:
      1. 1212402Domain d1xuca_: 1xuc A: [122332]
        automated match to d1euba_
        complexed with ca, pb3, zn
      2. 1212403Domain d1xucb_: 1xuc B: [122333]
        automated match to d1euba_
        complexed with ca, pb3, zn
    5. Domains for 1xud:
      1. 1212410Domain d1xuda_: 1xud A: [122334]
        automated match to d1euba_
        complexed with ca, pb4, zn
      2. 1212411Domain d1xudb_: 1xud B: [122335]
        automated match to d1euba_
        complexed with ca, pb4, zn
    6. Domains for 1xur:
      1. 1212412Domain d1xura_: 1xur A: [122338]
        automated match to d1euba_
        complexed with ca, pb5, zn
      2. 1212413Domain d1xurb_: 1xur B: [122339]
        automated match to d1euba_
        complexed with ca, pb5, zn
    7. Domains for 1you:
      1. 1212440Domain d1youa_: 1you A: [123783]
        automated match to d1euba_
        complexed with ca, pfd, so4, zn
      2. 1212441Domain d1youb_: 1you B: [123784]
        automated match to d1euba_
        complexed with ca, pfd, so4, zn
    8. Domains for 1ztq:
      1. 1212431Domain d1ztqa_: 1ztq A: [125651]
        automated match to d1euba_
        complexed with 033, ca, zn
      2. 1212432Domain d1ztqb_: 1ztq B: [125652]
        automated match to d1euba_
        complexed with 033, ca, zn
      3. 1212433Domain d1ztqc_: 1ztq C: [125653]
        automated match to d1euba_
        complexed with 033, ca, zn
      4. 1212434Domain d1ztqd_: 1ztq D: [125654]
        automated match to d1euba_
        complexed with 033, ca, zn
    9. Domains for 2d1n:
      1. 1212442Domain d2d1na_: 2d1n A: [131132]
        automated match to d830cb_
        complexed with ca, fa4, zn
      2. 1212443Domain d2d1nb_: 2d1n B: [131133]
        automated match to d830cb_
        complexed with ca, fa4, zn
    10. Domain for 2e2d:
    11. Domains for 2ow9:
      1. 1212404Domain d2ow9a_: 2ow9 A: [139419]
        automated match to d830ca_
        complexed with ca, hae, so4, sp6, zn
      2. 1212405Domain d2ow9b_: 2ow9 B: [139420]
        automated match to d830ca_
        complexed with ca, hae, so4, sp6, zn
    12. Domains for 2ozr:
      1. 1212446Domain d2ozra_: 2ozr A: [149119]
        automated match to d1euba_
        complexed with ca, gg1, hae, zn
      2. 1212447Domain d2ozrb_: 2ozr B: [149120]
        automated match to d1euba_
        complexed with ca, gg1, hae, zn
      3. 1212448Domain d2ozrc_: 2ozr C: [149121]
        automated match to d1euba_
        complexed with ca, gg1, hae, zn
      4. 1212449Domain d2ozrd_: 2ozr D: [149122]
        automated match to d1euba_
        complexed with ca, gg1, hae, zn
      5. 1212450Domain d2ozre_: 2ozr E: [149123]
        automated match to d1euba_
        complexed with ca, gg1, hae, zn
      6. 1212451Domain d2ozrf_: 2ozr F: [149124]
        automated match to d1euba_
        complexed with ca, gg1, hae, zn
      7. 1212452Domain d2ozrg_: 2ozr G: [149125]
        automated match to d1euba_
        complexed with ca, gg1, hae, zn
      8. 1212453Domain d2ozrh_: 2ozr H: [149126]
        automated match to d1euba_
        complexed with ca, gg1, hae, zn
    13. Domains for 2pjt:
      1. 1212454Domain d2pjta_: 2pjt A: [149575]
        automated match to d1euba_
        complexed with 347, ca, zn
      2. 1212455Domain d2pjtb_: 2pjt B: [149576]
        automated match to d1euba_
        complexed with 347, ca, zn
      3. 1212456Domain d2pjtc_: 2pjt C: [149577]
        automated match to d1euba_
        complexed with 347, ca, zn
      4. 1212457Domain d2pjtd_: 2pjt D: [149578]
        automated match to d1euba_
        complexed with 347, ca, zn
    14. Domains for 2yig:
      1. 1212406Domain d2yiga_: 2yig A: [170803]
        automated match to d1euba_
        complexed with 5el, ca, na, zn
      2. 1212407Domain d2yigb_: 2yig B: [170804]
        automated match to d1euba_
        complexed with 5el, ca, na, zn
    15. Domains for 3elm:
      1. 1212414Domain d3elma_: 3elm A: [175062]
        automated match to d1euba_
        complexed with 24f, ca, zn
      2. 1212415Domain d3elmb_: 3elm B: [175063]
        automated match to d1euba_
        complexed with 24f, ca, zn
    16. Domains for 3i7g:
      1. 1212417Domain d3i7ga_: 3i7g A: [178129]
        automated match to d1euba_
        complexed with 732, ca, fmt, zn
      2. 1212418Domain d3i7gb_: 3i7g B: [178130]
        automated match to d1euba_
        complexed with 732, ca, fmt, zn
    17. Domains for 3i7i:
      1. 1212438Domain d3i7ia_: 3i7i A: [178131]
        automated match to d1euba_
        complexed with 518, ca, zn
      2. 1212439Domain d3i7ib_: 3i7i B: [178132]
        automated match to d1euba_
        complexed with 518, ca, zn
    18. Domains for 3kec:
      1. 1212421Domain d3keca_: 3kec A: [179298]
        automated match to d1xuca1
        complexed with 3ke, ca, hae, so4, zn
      2. 1212422Domain d3kecb_: 3kec B: [179299]
        automated match to d1xuca1
        complexed with 3ke, ca, hae, so4, zn
    19. Domains for 3kej:
      1. 1212435Domain d3keja_: 3kej A: [179306]
        automated match to d1xuca1
        complexed with 3ej, ca, zn
      2. 1212436Domain d3kejb_: 3kej B: [179307]
        automated match to d1xuca1
        complexed with 3ej, ca, zn
    20. Domains for 3kek:
      1. 1212419Domain d3keka_: 3kek A: [179308]
        automated match to d1xuca1
        complexed with 3ek, ca, zn
      2. 1212420Domain d3kekb_: 3kek B: [179309]
        automated match to d1xuca1
        complexed with 3ek, ca, zn
    21. Domains for 3kry:
      1. 1212423Domain d3krya_: 3kry A: [179632]
        automated match to d1youb1
        complexed with 3kr, ca, zn
      2. 1212424Domain d3kryb_: 3kry B: [179633]
        automated match to d1youb1
        complexed with 3kr, ca, zn
      3. 1212425Domain d3kryc_: 3kry C: [191748]
        automated match to d1euba_
        complexed with 3kr, ca, zn
      4. 1212426Domain d3kryd_: 3kry D: [179634]
        automated match to d1youb1
        complexed with 3kr, ca, zn
    22. Domain for 3ljz:
    23. Domain for 3o2x:
    24. Domain for 3tvc:
    25. Domains for 3zxh:
      1. 1212400Domain d3zxha_: 3zxh A: [186654]
        automated match to d1euba_
        complexed with ca, e41, gol, zn
      2. 1212401Domain d3zxhb_: 3zxh B: [186655]
        automated match to d1euba_
        complexed with ca, e41, gol, zn
    26. Domains for 456c:
      1. 1212444Domain d456ca_: 456c A: [40402]
        complexed with ca, cbp, zn
      2. 1212445Domain d456cb_: 456c B: [40403]
        complexed with ca, cbp, zn
    27. Domains for 4a7b:
      1. 1212429Domain d4a7ba_: 4a7b A: [186732]
        automated match to d1euba_
        complexed with 3w4, 3w5, ca, gol, hae, na, zn
      2. 1212430Domain d4a7bb_: 4a7b B: [186733]
        automated match to d1euba_
        complexed with 3w4, 3w5, ca, gol, hae, na, zn
    28. Domains for 830c:
      1. 1212408Domain d830ca_: 830c A: [40400]
        complexed with ca, rs1, zn
      2. 1212409Domain d830cb_: 830c B: [40401]
        complexed with ca, rs1, zn
  2. 1212461Mouse (Mus musculus) [TaxId:10090] [55542] (1 PDB entry)

More info for Protein Collagenase-3 (MMP-13) from d.92.1.11: Matrix metalloproteases, catalytic domain

Timeline for Protein Collagenase-3 (MMP-13) from d.92.1.11: Matrix metalloproteases, catalytic domain: