Lineage for Family d.79.1.1: YjgF/L-PSP

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1657490Fold d.79: Bacillus chorismate mutase-like [55297] (9 superfamilies)
    core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest
  4. 1657491Superfamily d.79.1: YjgF-like [55298] (3 families) (S)
    forms trimers with three closely packed beta-sheets; possibly related to the IspF (d.79.5) and 4'-phosphopantetheinyl transferase superfamilies (d.150.1)
  5. 1657492Family d.79.1.1: YjgF/L-PSP [55299] (12 proteins)
    some members possess an endoribonuclease activity inhibiting mRNA translation

Proteins:

  1. 165749314.5 kda translational inhibitor protein, L-PSP [89979] (3 species)
    mammalian tumor associated antigen UK114
    1. 1657494Species Goat (Capra hircus) [TaxId:9925] [103077] (1 PDB entry)
    2. 1657501Species Human (Homo sapiens) [TaxId:9606] [89980] (1 PDB entry)
    3. 1657511Species Norway rat (Rattus norvegicus) [TaxId:10116] [103078] (1 PDB entry)
      Perchloric acid soluble protein
  2. 1657514Conserved 'hypothetical' protein YjgF [55300] (2 species)
    1. 1657515Species Escherichia coli [TaxId:562] [55301] (1 PDB entry)
    2. 1657519Species Haemophilus influenzae [TaxId:727] [82719] (1 PDB entry)
      YjgF homologue HI0719
  3. 1657523Highdosage growth inhibitor YER057cp (YEO7_YEAST) [64319] (1 species)
  4. 1657531Hypothetical protein SO1960 [160498] (1 species)
  5. 1657536Hypothetical protein SPy2060 [143527] (1 species)
  6. 1657550Hypothetical protein ST0811 [143521] (1 species)
  7. 1657554Hypothetical protein YjgH [103075] (1 species)
  8. 1657557Purine regulatory protein YabJ [55302] (2 species)
    1. 1657558Species Bacillus subtilis [TaxId:1423] [55303] (1 PDB entry)
    2. 1657562Species Clostridium thermocellum [TaxId:1515] [118024] (1 PDB entry)
      Uniprot Q4CI45
  9. 1657566Putative endonuclease APE1501 [143523] (1 species)
  10. 1657569Putative protein synthesis inhibitor TM0215 [143525] (1 species)
  11. 1657573Putative translation intiation inhibitor TTHA0137 [143529] (1 species)
  12. 1657576automated matches [190254] (4 species)
    not a true protein
    1. 1657577Species Escherichia coli [TaxId:562] [188034] (4 PDB entries)
    2. 1657590Species Pyrococcus horikoshii [TaxId:53953] [187648] (1 PDB entry)
    3. 1657603Species Thermus thermophilus HB8 [TaxId:300852] [187037] (1 PDB entry)
    4. 1657609Species Thermus thermophilus [TaxId:274] [187040] (2 PDB entries)

More info for Family d.79.1.1: YjgF/L-PSP

Timeline for Family d.79.1.1: YjgF/L-PSP: