Lineage for Protein: Splicesomal U1A protein

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1650133Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 1652149Superfamily d.58.7: RNA-binding domain, RBD [54928] (6 families) (S)
  5. 1652150Family d.58.7.1: Canonical RBD [54929] (68 proteins)
  6. 1652456Protein Splicesomal U1A protein [54932] (2 species)
    duplication: contains two domains of this fold

Species:

  1. 1652457Fruit fly (Drosophila melanogaster) [TaxId:7227] [160313] (3 PDB entries)
    Uniprot P43332 1-104! Uniprot P43332 134-216
    1. Domain for 2aym:
    2. Domain for 2b0g:
    3. Domain for 2k3k:
  2. 1652461Human (Homo sapiens) [TaxId:9606] [54933] (43 PDB entries)
    Uniprot P09012 1-97 ! Uniprot P09012 4-98 ! Uniprot P09012 1-98
    1. Domain for 1aud:
    2. Domain for 1cx0:
      • 1652474Domain d1cx0a_: 1cx0 A: [39158]
        domain 1, complex with a hepatitis delta virus ribozyme
        protein/RNA complex; complexed with mg
    3. Domain for 1drz:
      • 1652484Domain d1drza_: 1drz A: [39159]
        domain 1, complex with a hepatitis delta virus ribozyme
        protein/RNA complex; complexed with mg, so4
    4. Domains for 1dz5:
      1. 1652521Domain d1dz5a_: 1dz5 A: [39162]
        domain 1
        protein/RNA complex
      2. 1652522Domain d1dz5b_: 1dz5 B: [39163]
        domain 1
        protein/RNA complex
    5. Domain for 1fht:
    6. Domains for 1m5k:
      1. 1652477Domain d1m5kc_: 1m5k C: [74509]
        domain 1, complex with a hairpin ribozyme
        protein/RNA complex; complexed with ca, cl
      2. 1652478Domain d1m5kf_: 1m5k F: [74510]
        domain 1, complex with a hairpin ribozyme
        protein/RNA complex; complexed with ca, cl
    7. Domains for 1m5o:
      1. 1652468Domain d1m5oc_: 1m5o C: [78654]
        domain 1, complex with a ribozyme
        protein/RNA complex; complexed with ca
      2. 1652469Domain d1m5of_: 1m5o F: [78655]
        domain 1, complex with a ribozyme
        protein/RNA complex; complexed with ca
    8. Domains for 1m5p:
      1. 1652486Domain d1m5pc_: 1m5p C: [78656]
        domain 1, complex with a ribozyme
        protein/RNA complex; complexed with ca
      2. 1652487Domain d1m5pf_: 1m5p F: [78657]
        domain 1, complex with a ribozyme
        protein/RNA complex; complexed with ca
    9. Domains for 1m5v:
      1. 1652475Domain d1m5vc_: 1m5v C: [78662]
        domain 1, complex with a ribozyme
        protein/RNA complex; complexed with ca, mpd
      2. 1652476Domain d1m5vf_: 1m5v F: [78663]
        domain 1, complex with a ribozyme
        protein/RNA complex; complexed with ca, mpd
    10. Domains for 1nu4:
      1. 1652462Domain d1nu4a_: 1nu4 A: [80731]
        contains a pre-organized C-terminal helix
        complexed with mg, mla
      2. 1652463Domain d1nu4b_: 1nu4 B: [80732]
        contains a pre-organized C-terminal helix
        complexed with mg, mla
    11. Domains for 1oia:
      1. 1652471Domain d1oiaa_: 1oia A: [87051]
      2. 1652472Domain d1oiab_: 1oia B: [87052]
    12. Domain for 1sj3:
    13. Domain for 1sj4:
    14. Domain for 1sjf:
    15. Domain for 1u6b:
    16. Domains for 1urn:
      1. 1652464Domain d1urna_: 1urn A: [39153]
        domain 1
        protein/RNA complex; complexed with cl, gol; mutant
      2. 1652465Domain d1urnb_: 1urn B: [39154]
        domain 1
        protein/RNA complex; complexed with cl, gol; mutant
      3. 1652466Domain d1urnc_: 1urn C: [39155]
        domain 1
        protein/RNA complex; complexed with cl, gol; mutant
    17. Domain for 1vbx:
    18. Domain for 1vby:
    19. Domain for 1vbz:
    20. Domain for 1vc0:
    21. Domain for 1vc5:
    22. Domain for 1vc6:
    23. Domain for 1vc7:
    24. Domain for 1zzn:
    25. Domains for 2nz4:
      1. 1652480Domain d2nz4a_: 2nz4 A: [138833]
        automated match to d1auda_
        protein/RNA complex; complexed with glp, mg
      2. 1652481Domain d2nz4b_: 2nz4 B: [138834]
        automated match to d1auda_
        protein/RNA complex; complexed with glp, mg
      3. 1652482Domain d2nz4c_: 2nz4 C: [138835]
        automated match to d1auda_
        protein/RNA complex; complexed with glp, mg
      4. 1652483Domain d2nz4d_: 2nz4 D: [138836]
        automated match to d1auda_
        protein/RNA complex; complexed with glp, mg
    26. Domain for 2oih:
    27. Domain for 2oj3:
    28. Domain for 2u1a:
    29. Domain for 3bo2:
    30. Domain for 3bo3:
    31. Domain for 3bo4:
    32. Domains for 3cul:
      1. 1652500Domain d3cula_: 3cul A: [156993]
        automated match to d1auda_
        protein/RNA complex; complexed with k, mg
      2. 1652501Domain d3culb_: 3cul B: [156994]
        automated match to d1auda_
        protein/RNA complex; complexed with k, mg
    33. Domains for 3cun:
      1. 1652513Domain d3cuna_: 3cun A: [156997]
        automated match to d1dz5a_
        protein/RNA complex; complexed with co, k, mg
      2. 1652514Domain d3cunb_: 3cun B: [156998]
        automated match to d1dz5a_
        protein/RNA complex; complexed with co, k, mg
    34. Domain for 3egz:
    35. Domains for 3g9c:
      1. 1652503Domain d3g9ca_: 3g9c A: [176436]
        automated match to d1auda_
        complexed with glp, mg
      2. 1652504Domain d3g9cb_: 3g9c B: [176437]
        automated match to d1auda_
        complexed with glp, mg
      3. 1652505Domain d3g9cc_: 3g9c C: [176438]
        automated match to d1auda_
        complexed with glp, mg
      4. 1652506Domain d3g9cd_: 3g9c D: [176439]
        automated match to d1auda_
        complexed with glp, mg
    36. Domains for 3hhn:
      1. 1652494Domain d3hhnb_: 3hhn B: [177580]
        automated match to d1auda_
        protein/RNA complex; complexed with mg
      2. 1652495Domain d3hhnd_: 3hhn D: [177581]
        automated match to d1auda_
        protein/RNA complex; complexed with mg
    37. Domain for 3irw:
    38. Domains for 3l3c:
      1. 1652509Domain d3l3ca_: 3l3c A: [179902]
        automated match to d1urna_
        protein/RNA complex; complexed with g6p, mg
      2. 1652510Domain d3l3cb_: 3l3c B: [179903]
        automated match to d1urna_
        protein/RNA complex; complexed with g6p, mg
      3. 1652511Domain d3l3cc_: 3l3c C: [179904]
        automated match to d1urna_
        protein/RNA complex; complexed with g6p, mg
      4. 1652512Domain d3l3cd_: 3l3c D: [179905]
        automated match to d1urna_
        protein/RNA complex; complexed with g6p, mg
    39. Domain for 3mum:
    40. Domain for 3mxh:
    41. Domain for 3ucu:
    42. Domain for 3ucz:
    43. Domain for 3ud4:

More info for Protein Splicesomal U1A protein from d.58.7.1: Canonical RBD

Timeline for Protein Splicesomal U1A protein from d.58.7.1: Canonical RBD: