Lineage for Family d.22.1.1: Fluorescent proteins

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2164731Fold d.22: GFP-like [54510] (1 superfamily)
    beta-sheet folds into a barrel (n=11, S=14) around the central helix
  4. 2164732Superfamily d.22.1: GFP-like [54511] (3 families) (S)
  5. 2164733Family d.22.1.1: Fluorescent proteins [54512] (6 protein domains)

Protein Domains:

  1. 2164734GFP-like non-fluorescent chromoprotein FP595 [117863] (1 species)
  2. 2164737Green fluorescent protein, GFP [54513] (4 species)
    1. 2164738Species Clytia gregaria [TaxId:27801] [188531] (1 PDB entry)
    2. 2164740Species Galaxea fascicularis [TaxId:46745] [190027] (1 PDB entry)
    3. 2164743Species Jellyfish (Aequorea victoria) [TaxId:6100] [54514] (175 PDB entries)
      Uniprot P42212
    4. 2164983Species Renilla reniformis [TaxId:6136] [160126] (2 PDB entries)
      Uniprot Q963I9 7-226
  3. 2164992Pocilloporin pigment Rtms5 [89866] (1 species)
  4. 2164997Red fluorescent protein (fp583 or dsred(clontech)) [54515] (1 species)
  5. 2165011Red fluorescent protein fp61 [102854] (1 species)
  6. 2165015automated matches [190406] (19 species)
    not a true protein
    1. 2165016Species Aequorea coerulescens [TaxId:210840] [189267] (7 PDB entries)
    2. 2165023Species Anaplasma marginale [TaxId:770] [277056] (1 PDB entry)
    3. 2165027Species Artificial gene [TaxId:32630] [189424] (7 PDB entries)
    4. 2165060Species Azotobacter vinelandii [TaxId:354] [188536] (1 PDB entry)
    5. 2165065Species Cfp marker [TaxId:141850] [276575] (1 PDB entry)
    6. 2165067Species Cnidopus japonicus [TaxId:380086] [188533] (2 PDB entries)
    7. 2165084Species Coral (Discosoma sp.) [TaxId:86600] [188539] (21 PDB entries)
    8. 2165135Species Coral (Montipora efflorescens) [TaxId:105610] [188535] (3 PDB entries)
    9. 2165153Species Dendronephthya sp. [TaxId:191210] [188919] (1 PDB entry)
    10. 2165162Species Discosoma sp. [TaxId:301246] [188540] (5 PDB entries)
    11. 2165171Species Discosoma striata [188537] (1 PDB entry)
    12. 2165178Species Heteractis crispa [TaxId:175771] [188161] (1 PDB entry)
    13. 2165183Species Jellyfish (Aequorea victoria) [TaxId:6100] [188134] (52 PDB entries)
    14. 2165245Species Montipora sp. [TaxId:321802] [189025] (4 PDB entries)
    15. 2165260Species Sea anemone (Anemonia sulcata) [TaxId:6108] [188527] (2 PDB entries)
    16. 2165271Species Sea anemone (Entacmaea quadricolor) [TaxId:6118] [188538] (21 PDB entries)
    17. 2274594Species Escherichia coli [TaxId:562] [317895] (2 PDB entries)
    18. 2296261Species Human respiratory syncytial virus [TaxId:11250] [339562] (1 PDB entry)
    19. 2298819Species Vaccinia virus [TaxId:10245] [342120] (1 PDB entry)

More info for Family d.22.1.1: Fluorescent proteins

Timeline for Family d.22.1.1: Fluorescent proteins: