SCOPe 2.04: Family d.15.4.2: 2Fe-2S ferredoxin domains from multidomain proteins

Lineage for Family d.15.4.2: 2Fe-2S ferredoxin domains from multidomain proteins

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.4: 2Fe-2S ferredoxin-like [54292] (3 families)

5. Family d.15.4.2: 2Fe-2S ferredoxin domains from multidomain proteins [54312] (14 proteins)

Proteins:

1. 4-hydroxybenzoyl-CoA reductase gamma subunit HrcC, N-terminal domain [117836] (1 species)

   • Species Thauera aromatica [TaxId:59405] [117837] (2 PDB entries)
     Uniprot O33818

2. Aldehyde oxidoreductase, N-terminal domain [54315] (2 species)

   1. Species Desulfovibrio desulfuricans [TaxId:876] [54317] (1 PDB entry)

   2. Species Desulfovibrio gigas [TaxId:879] [54316] (11 PDB entries)
      Uniprot Q46509

3. Benzoate dioxygenase reductase, N-terminal domain [75368] (1 species)

   • Species Acinetobacter sp. [TaxId:472] [75369] (1 PDB entry)

4. Carbone monoxide (CO) dehydrogenase iron-sulfur protein, N-domain [54320] (2 species)

   1. Species Hydrogenophaga pseudoflava [TaxId:47421] [54322] (2 PDB entries)

   2. Species Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId:40137] [54321] (6 PDB entries)

5. Fe-only hydrogenase, N-terminal domain [54313] (1 species)

   • Species Clostridium pasteurianum [TaxId:1501] [54314] (4 PDB entries)

6. Fumarate reductase iron-sulfur protein, N-terminal domain [54325] (3 species)

   1. Species Escherichia coli [TaxId:362663] [224921] (1 PDB entry)

   2. Species Escherichia coli [TaxId:562] [54326] (6 PDB entries)

   3. Species Wolinella succinogenes [TaxId:844] [54327] (4 PDB entries)

7. Methane monooxygenase reductase N-terminal domain [69668] (1 species)

   • Species Methylococcus capsulatus [TaxId:414] [69669] (1 PDB entry)

8. Nadh-quinone oxidoreductase chain 3, Nqo3, N-terminal domain [142982] (1 species)

   • Species Thermus thermophilus [TaxId:274] [142983] (1 PDB entry)
     Uniprot Q56223 1-95

9. Phthalate dioxygenase reductase, C-terminal domain [54323] (1 species)
   two other domains are common to ferredoxin reductase

   • Species Pseudomonas cepacia, db01 [TaxId:292] [54324] (1 PDB entry)

10. Quinoline 2-oxidoreductase small subunit QorS, N-domain [110808] (1 species)

    • Species Pseudomonas putida [TaxId:303] [110809] (1 PDB entry)
      Uniprot P72223

11. Succinate dehydogenase iron-sulfur protein, N-terminal domain [82586] (3 species)

    1. Species Chicken (Gallus gallus) [TaxId:9031] [254759] (6 PDB entries)

    2. Species Escherichia coli [TaxId:562] [82587] (5 PDB entries)

    3. Species Pig (Sus scrofa) [TaxId:9823] [254758] (5 PDB entries)

12. Xanthine dehydrogenase chain A, N-terminal domain [69666] (1 species)

    • Species Rhodobacter capsulatus [TaxId:1061] [69667] (2 PDB entries)

13. Xanthine oxidase, N-terminal domain [54318] (1 species)

    • Species Cow (Bos taurus) [TaxId:9913] [54319] (11 PDB entries)
      Uniprot P80457

14. automated matches [231466] (4 species)
    not a true protein

    1. Species Cow (Bos taurus) [TaxId:9913] [232069] (9 PDB entries)

    2. Species Escherichia coli [TaxId:216592] [256013] (2 PDB entries)

    3. Species Escherichia coli [TaxId:562] [231467] (2 PDB entries)

    4. Species Wolinella succinogenes [TaxId:844] [255061] (1 PDB entry)

More info for Family d.15.4.2: 2Fe-2S ferredoxin domains from multidomain proteins

Timeline for Family d.15.4.2: 2Fe-2S ferredoxin domains from multidomain proteins:

• Family d.15.4.2: 2Fe-2S ferredoxin domains from multidomain proteins first appeared (with stable ids) in SCOP 1.55
  
• Family d.15.4.2: 2Fe-2S ferredoxin domains from multidomain proteins appears in SCOPe 2.03
  
• Family d.15.4.2: 2Fe-2S ferredoxin domains from multidomain proteins appears in SCOPe 2.05
  
• Family d.15.4.2: 2Fe-2S ferredoxin domains from multidomain proteins appears in the current release, SCOPe 2.08