Lineage for Protein: Elongin B

  1. Root: SCOPe 2.03
  2. 1396887Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1402144Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 1402145Superfamily d.15.1: Ubiquitin-like [54236] (9 families) (S)
  5. 1402146Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 1402170Protein Elongin B [54246] (2 species)

Species:

  1. 1402171Human (Homo sapiens) [TaxId:9606] [54247] (16 PDB entries)
    1. Domain for 1lm8:
    2. Domain for 1lqb:
    3. Domains for 1vcb:
      1. 1402199Domain d1vcba_: 1vcb A: [37603]
        Other proteins in same PDB: d1vcbb_, d1vcbc_, d1vcbe_, d1vcbf_, d1vcbh_, d1vcbi_, d1vcbk_, d1vcbl_
      2. 1402200Domain d1vcbd_: 1vcb D: [37604]
        Other proteins in same PDB: d1vcbb_, d1vcbc_, d1vcbe_, d1vcbf_, d1vcbh_, d1vcbi_, d1vcbk_, d1vcbl_
      3. 1402201Domain d1vcbg_: 1vcb G: [37605]
        Other proteins in same PDB: d1vcbb_, d1vcbc_, d1vcbe_, d1vcbf_, d1vcbh_, d1vcbi_, d1vcbk_, d1vcbl_
      4. 1402202Domain d1vcbj_: 1vcb J: [37606]
        Other proteins in same PDB: d1vcbb_, d1vcbc_, d1vcbe_, d1vcbf_, d1vcbh_, d1vcbi_, d1vcbk_, d1vcbl_
    4. Domain for 2jz3:
    5. Domains for 3dcg:
      1. 1402178Domain d3dcga_: 3dcg A: [157535]
        Other proteins in same PDB: d3dcgb_, d3dcgd_
        automated match to d1lm8b_
        protein/RNA complex
      2. 1402179Domain d3dcgc_: 3dcg C: [161650]
        Other proteins in same PDB: d3dcgb_, d3dcgd_
        automated match to d1lm8b_
        protein/RNA complex
    6. Domains for 3zng:
      1. 1402211Domain d3zngc_: 3zng C: [229480]
        Other proteins in same PDB: d3zngb_, d3znge_
        automated match to d1lm8b_
        complexed with edo
      2. 1402212Domain d3zngf_: 3zng F: [229479]
        Other proteins in same PDB: d3zngb_, d3znge_
        automated match to d1lm8b_
        complexed with edo
    7. Domains for 3zrc:
      1. 1402217Domain d3zrca_: 3zrc A: [218404]
        Other proteins in same PDB: d3zrcb_, d3zrcc_, d3zrce_, d3zrcf_, d3zrch_, d3zrci_, d3zrck_, d3zrcl_
        automated match to d1lm8b_
        complexed with l8b
      2. 1402218Domain d3zrcd_: 3zrc D: [218407]
        Other proteins in same PDB: d3zrcb_, d3zrcc_, d3zrce_, d3zrcf_, d3zrch_, d3zrci_, d3zrck_, d3zrcl_
        automated match to d1lm8b_
        complexed with l8b
      3. 1402219Domain d3zrcg_: 3zrc G: [218410]
        Other proteins in same PDB: d3zrcb_, d3zrcc_, d3zrce_, d3zrcf_, d3zrch_, d3zrci_, d3zrck_, d3zrcl_
        automated match to d1lm8b_
        complexed with l8b
      4. 1402220Domain d3zrcj_: 3zrc J: [218413]
        Other proteins in same PDB: d3zrcb_, d3zrcc_, d3zrce_, d3zrcf_, d3zrch_, d3zrci_, d3zrck_, d3zrcl_
        automated match to d1lm8b_
        complexed with l8b
    8. Domains for 3zrf:
      1. 1402213Domain d3zrfa_: 3zrf A: [218416]
        Other proteins in same PDB: d3zrfb_, d3zrfc_, d3zrfe_, d3zrff_, d3zrfh_, d3zrfi_, d3zrfk_, d3zrfl_
        automated match to d1lm8b_
      2. 1402214Domain d3zrfd_: 3zrf D: [218419]
        Other proteins in same PDB: d3zrfb_, d3zrfc_, d3zrfe_, d3zrff_, d3zrfh_, d3zrfi_, d3zrfk_, d3zrfl_
        automated match to d1lm8b_
      3. 1402215Domain d3zrfg_: 3zrf G: [218422]
        Other proteins in same PDB: d3zrfb_, d3zrfc_, d3zrfe_, d3zrff_, d3zrfh_, d3zrfi_, d3zrfk_, d3zrfl_
        automated match to d1lm8b_
      4. 1402216Domain d3zrfj_: 3zrf J: [218425]
        Other proteins in same PDB: d3zrfb_, d3zrfc_, d3zrfe_, d3zrff_, d3zrfh_, d3zrfi_, d3zrfk_, d3zrfl_
        automated match to d1lm8b_
    9. Domains for 3ztc:
      1. 1402203Domain d3ztca_: 3ztc A: [218458]
        Other proteins in same PDB: d3ztcb_, d3ztcc_, d3ztce_, d3ztcf_, d3ztch_, d3ztci_, d3ztck_, d3ztcl_
        automated match to d1lm8b_
        complexed with tr0
      2. 1402204Domain d3ztcd_: 3ztc D: [218461]
        Other proteins in same PDB: d3ztcb_, d3ztcc_, d3ztce_, d3ztcf_, d3ztch_, d3ztci_, d3ztck_, d3ztcl_
        automated match to d1lm8b_
        complexed with tr0
      3. 1402205Domain d3ztcg_: 3ztc G: [218464]
        Other proteins in same PDB: d3ztcb_, d3ztcc_, d3ztce_, d3ztcf_, d3ztch_, d3ztci_, d3ztck_, d3ztcl_
        automated match to d1lm8b_
        complexed with tr0
      4. 1402206Domain d3ztcj_: 3ztc J: [218467]
        Other proteins in same PDB: d3ztcb_, d3ztcc_, d3ztce_, d3ztcf_, d3ztch_, d3ztci_, d3ztck_, d3ztcl_
        automated match to d1lm8b_
        complexed with tr0
    10. Domains for 3ztd:
      1. 1402207Domain d3ztda_: 3ztd A: [218470]
        Other proteins in same PDB: d3ztdb_, d3ztdc_, d3ztde_, d3ztdf_, d3ztdh_, d3ztdi_, d3ztdk_, d3ztdl_
        automated match to d1lm8b_
        complexed with ztd
      2. 1402208Domain d3ztdd_: 3ztd D: [218473]
        Other proteins in same PDB: d3ztdb_, d3ztdc_, d3ztde_, d3ztdf_, d3ztdh_, d3ztdi_, d3ztdk_, d3ztdl_
        automated match to d1lm8b_
        complexed with ztd
      3. 1402209Domain d3ztdg_: 3ztd G: [218476]
        Other proteins in same PDB: d3ztdb_, d3ztdc_, d3ztde_, d3ztdf_, d3ztdh_, d3ztdi_, d3ztdk_, d3ztdl_
        automated match to d1lm8b_
        complexed with ztd
      4. 1402210Domain d3ztdj_: 3ztd J: [218479]
        Other proteins in same PDB: d3ztdb_, d3ztdc_, d3ztde_, d3ztdf_, d3ztdh_, d3ztdi_, d3ztdk_, d3ztdl_
        automated match to d1lm8b_
        complexed with ztd
    11. Domains for 3zun:
      1. 1402195Domain d3zuna_: 3zun A: [218516]
        Other proteins in same PDB: d3zunb_, d3zunc_, d3zune_, d3zunf_, d3zunh_, d3zuni_, d3zunk_, d3zunl_
        automated match to d1lm8b_
        complexed with gol, zun
      2. 1402196Domain d3zund_: 3zun D: [218519]
        Other proteins in same PDB: d3zunb_, d3zunc_, d3zune_, d3zunf_, d3zunh_, d3zuni_, d3zunk_, d3zunl_
        automated match to d1lm8b_
        complexed with gol, zun
      3. 1402197Domain d3zung_: 3zun G: [218522]
        Other proteins in same PDB: d3zunb_, d3zunc_, d3zune_, d3zunf_, d3zunh_, d3zuni_, d3zunk_, d3zunl_
        automated match to d1lm8b_
        complexed with gol, zun
      4. 1402198Domain d3zunj_: 3zun J: [218525]
        Other proteins in same PDB: d3zunb_, d3zunc_, d3zune_, d3zunf_, d3zunh_, d3zuni_, d3zunk_, d3zunl_
        automated match to d1lm8b_
        complexed with gol, zun
    12. Domains for 4awj:
      1. 1402184Domain d4awja_: 4awj A: [201531]
        Other proteins in same PDB: d4awjb_, d4awjc_, d4awje_, d4awjf_, d4awjh_, d4awji_, d4awjk_, d4awjl_
        automated match to d4awjg_
        complexed with act, acy, gol, v6f
      2. 1402185Domain d4awjd_: 4awj D: [193395]
        Other proteins in same PDB: d4awjb_, d4awjc_, d4awje_, d4awjf_, d4awjh_, d4awji_, d4awjk_, d4awjl_
        automated match to d1lqba_
        complexed with act, acy, gol, v6f
      3. 1402186Domain d4awjg_: 4awj G: [193391]
        Other proteins in same PDB: d4awjb_, d4awjc_, d4awje_, d4awjf_, d4awjh_, d4awji_, d4awjk_, d4awjl_
        automated match to d1lqba_
        complexed with act, acy, gol, v6f
      4. 1402187Domain d4awjj_: 4awj J: [201537]
        Other proteins in same PDB: d4awjb_, d4awjc_, d4awje_, d4awjf_, d4awjh_, d4awji_, d4awjk_, d4awjl_
        automated match to d4awjg_
        complexed with act, acy, gol, v6f
    13. Domains for 4b95:
      1. 1402192Domain d4b95a_: 4b95 A: [201582]
        Other proteins in same PDB: d4b95b_, d4b95c_, d4b95e_, d4b95f_, d4b95h_, d4b95i_, d4b95j_, d4b95k_, d4b95l_
        automated match to d1lm8b_
        complexed with act, uck
      2. 1402193Domain d4b95d_: 4b95 D: [201585]
        Other proteins in same PDB: d4b95b_, d4b95c_, d4b95e_, d4b95f_, d4b95h_, d4b95i_, d4b95j_, d4b95k_, d4b95l_
        automated match to d1lm8b_
        complexed with act, uck
      3. 1402194Domain d4b95g_: 4b95 G: [201588]
        Other proteins in same PDB: d4b95b_, d4b95c_, d4b95e_, d4b95f_, d4b95h_, d4b95i_, d4b95j_, d4b95k_, d4b95l_
        automated match to d1lm8b_
        complexed with act, uck
    14. Domains for 4b9k:
      1. 1402173Domain d4b9ka_: 4b9k A: [201591]
        Other proteins in same PDB: d4b9kb_, d4b9kc_, d4b9ke_, d4b9kf_, d4b9kh_, d4b9ki_, d4b9kk_, d4b9kl_
        automated match to d4awjg_
        complexed with act, tg0
      2. 1402174Domain d4b9kd_: 4b9k D: [201594]
        Other proteins in same PDB: d4b9kb_, d4b9kc_, d4b9ke_, d4b9kf_, d4b9kh_, d4b9ki_, d4b9kk_, d4b9kl_
        automated match to d4awjg_
        complexed with act, tg0
      3. 1402175Domain d4b9kg_: 4b9k G: [201597]
        Other proteins in same PDB: d4b9kb_, d4b9kc_, d4b9ke_, d4b9kf_, d4b9kh_, d4b9ki_, d4b9kk_, d4b9kl_
        automated match to d4awjg_
        complexed with act, tg0
      4. 1402176Domain d4b9kj_: 4b9k J: [201599]
        Other proteins in same PDB: d4b9kb_, d4b9kc_, d4b9ke_, d4b9kf_, d4b9kh_, d4b9ki_, d4b9kk_, d4b9kl_
        automated match to d4awjg_
        complexed with act, tg0
    15. Domains for 4bks:
      1. 1402180Domain d4bksa_: 4bks A: [229188]
        Other proteins in same PDB: d4bksb_, d4bksc_, d4bkse_, d4bksf_, d4bksh_, d4bksi_, d4bksk_, d4bksl_
        automated match to d4awjg_
        complexed with act, x6c
      2. 1402181Domain d4bksd_: 4bks D: [229185]
        Other proteins in same PDB: d4bksb_, d4bksc_, d4bkse_, d4bksf_, d4bksh_, d4bksi_, d4bksk_, d4bksl_
        automated match to d4awjg_
        complexed with act, x6c
      3. 1402182Domain d4bksg_: 4bks G: [229187]
        Other proteins in same PDB: d4bksb_, d4bksc_, d4bkse_, d4bksf_, d4bksh_, d4bksi_, d4bksk_, d4bksl_
        automated match to d4awjg_
        complexed with act, x6c
      4. 1402183Domain d4bksj_: 4bks J: [229194]
        Other proteins in same PDB: d4bksb_, d4bksc_, d4bkse_, d4bksf_, d4bksh_, d4bksi_, d4bksk_, d4bksl_
        automated match to d4awjg_
        complexed with act, x6c
    16. Domains for 4bkt:
      1. 1402188Domain d4bkta_: 4bkt A: [229200]
        Other proteins in same PDB: d4bktb_, d4bktc_, d4bkte_, d4bktf_, d4bkth_, d4bkti_, d4bktk_, d4bktl_
        automated match to d4b9ka_
        complexed with arg, glu, qd0
      2. 1402189Domain d4bktd_: 4bkt D: [229197]
        Other proteins in same PDB: d4bktb_, d4bktc_, d4bkte_, d4bktf_, d4bkth_, d4bkti_, d4bktk_, d4bktl_
        automated match to d4awjg_
        complexed with arg, glu, qd0
      3. 1402190Domain d4bktg_: 4bkt G: [229199]
        Other proteins in same PDB: d4bktb_, d4bktc_, d4bkte_, d4bktf_, d4bkth_, d4bkti_, d4bktk_, d4bktl_
        automated match to d4awjg_
        complexed with arg, glu, qd0
      4. 1402191Domain d4bktj_: 4bkt J: [229206]
        Other proteins in same PDB: d4bktb_, d4bktc_, d4bkte_, d4bktf_, d4bkth_, d4bkti_, d4bktk_, d4bktl_
        automated match to d4awjg_
        complexed with arg, glu, qd0
  2. 1402222Mouse (Mus musculus) [TaxId:10090] [142930] (1 PDB entry)
    Uniprot P62869 1-98

More info for Protein Elongin B from d.15.1.1: Ubiquitin-related

Timeline for Protein Elongin B from d.15.1.1: Ubiquitin-related: