Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1892544Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 1892545Superfamily d.15.1: Ubiquitin-like [54236] (9 families) (S)
  5. 1892546Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 1892686Protein Nedd8 [54244] (1 species)
  7. 1892687Species Human (Homo sapiens) [TaxId:9606] [54245] (15 PDB entries)
    Uniprot Q15843

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 1ndd:
    1. 1892689Domain d1ndda_: 1ndd A: [37599]
      complexed with cl, so4
    2. 1892690Domain d1nddb_: 1ndd B: [37600]
      complexed with cl, so4
    3. 1892691Domain d1nddc_: 1ndd C: [37601]
      complexed with cl, so4
    4. 1892692Domain d1nddd_: 1ndd D: [37602]
      complexed with cl, so4
  2. Domain(s) for 1r4m:
    1. 1892709Domain d1r4mi_: 1r4m I: [97007]
      Other proteins in same PDB: d1r4ma_, d1r4mb_, d1r4mc_, d1r4md_, d1r4me_, d1r4mf_, d1r4mg_, d1r4mh_
      complexed with APPBP1 and UBA3
      complexed with zn
    2. 1892710Domain d1r4mj_: 1r4m J: [97008]
      Other proteins in same PDB: d1r4ma_, d1r4mb_, d1r4mc_, d1r4md_, d1r4me_, d1r4mf_, d1r4mg_, d1r4mh_
      complexed with APPBP1 and UBA3
      complexed with zn
    3. 1892711Domain d1r4mk_: 1r4m K: [97009]
      Other proteins in same PDB: d1r4ma_, d1r4mb_, d1r4mc_, d1r4md_, d1r4me_, d1r4mf_, d1r4mg_, d1r4mh_
      complexed with APPBP1 and UBA3
      complexed with zn
    4. 1892712Domain d1r4ml_: 1r4m L: [97010]
      Other proteins in same PDB: d1r4ma_, d1r4mb_, d1r4mc_, d1r4md_, d1r4me_, d1r4mf_, d1r4mg_, d1r4mh_
      complexed with APPBP1 and UBA3
      complexed with zn
  3. Domain(s) for 1r4n:
    1. 1892721Domain d1r4ni_: 1r4n I: [97019]
      Other proteins in same PDB: d1r4na_, d1r4nb_, d1r4nc_, d1r4nd_, d1r4ne_, d1r4nf_, d1r4ng_, d1r4nh_
      complexed with APPBP1 and UBA3
      complexed with atp, zn
    2. 1892722Domain d1r4nj_: 1r4n J: [97020]
      Other proteins in same PDB: d1r4na_, d1r4nb_, d1r4nc_, d1r4nd_, d1r4ne_, d1r4nf_, d1r4ng_, d1r4nh_
      complexed with APPBP1 and UBA3
      complexed with atp, zn
    3. 1892723Domain d1r4nk_: 1r4n K: [97021]
      Other proteins in same PDB: d1r4na_, d1r4nb_, d1r4nc_, d1r4nd_, d1r4ne_, d1r4nf_, d1r4ng_, d1r4nh_
      complexed with APPBP1 and UBA3
      complexed with atp, zn
    4. 1892724Domain d1r4nl_: 1r4n L: [97022]
      Other proteins in same PDB: d1r4na_, d1r4nb_, d1r4nc_, d1r4nd_, d1r4ne_, d1r4nf_, d1r4ng_, d1r4nh_
      complexed with APPBP1 and UBA3
      complexed with atp, zn
  4. Domain(s) for 1xt9:
  5. Domain(s) for 2ko3:
  6. Domain(s) for 2nvu:
    1. 1892705Domain d2nvui_: 2nvu I: [138663]
      Other proteins in same PDB: d2nvua_, d2nvub1, d2nvub2, d2nvuc1
      automated match to d1nddb_
      complexed with atp, mg, zn
    2. 1892706Domain d2nvuj_: 2nvu J: [138664]
      Other proteins in same PDB: d2nvua_, d2nvub1, d2nvub2, d2nvuc1
      automated match to d1nddb_
      complexed with atp, mg, zn
  7. Domain(s) for 3dbh:
    1. 1892697Domain d3dbhi_: 3dbh I: [157472]
      Other proteins in same PDB: d3dbha_, d3dbhb_, d3dbhc_, d3dbhd_, d3dbhe_, d3dbhf_, d3dbhg_, d3dbhh_
      automated match to d1nddb_
      complexed with zn
    2. 1892698Domain d3dbhj_: 3dbh J: [161644]
      Other proteins in same PDB: d3dbha_, d3dbhb_, d3dbhc_, d3dbhd_, d3dbhe_, d3dbhf_, d3dbhg_, d3dbhh_
      automated match to d1nddb_
      complexed with zn
    3. 1892699Domain d3dbhk_: 3dbh K: [161645]
      Other proteins in same PDB: d3dbha_, d3dbhb_, d3dbhc_, d3dbhd_, d3dbhe_, d3dbhf_, d3dbhg_, d3dbhh_
      automated match to d1nddb_
      complexed with zn
    4. 1892700Domain d3dbhl_: 3dbh L: [161646]
      Other proteins in same PDB: d3dbha_, d3dbhb_, d3dbhc_, d3dbhd_, d3dbhe_, d3dbhf_, d3dbhg_, d3dbhh_
      automated match to d1nddb_
      complexed with zn
  8. Domain(s) for 3dbl:
    1. 1892701Domain d3dbli_: 3dbl I: [157481]
      Other proteins in same PDB: d3dbla_, d3dblb_, d3dblc_, d3dbld_, d3dble_, d3dblf_, d3dblg_, d3dblh_
      automated match to d1nddb_
      complexed with zn
    2. 1892702Domain d3dblj_: 3dbl J: [161647]
      Other proteins in same PDB: d3dbla_, d3dblb_, d3dblc_, d3dbld_, d3dble_, d3dblf_, d3dblg_, d3dblh_
      automated match to d1nddb_
      complexed with zn
    3. 1892703Domain d3dblk_: 3dbl K: [161648]
      Other proteins in same PDB: d3dbla_, d3dblb_, d3dblc_, d3dbld_, d3dble_, d3dblf_, d3dblg_, d3dblh_
      automated match to d1nddb_
      complexed with zn
    4. 1892704Domain d3dbll_: 3dbl L: [161649]
      Other proteins in same PDB: d3dbla_, d3dblb_, d3dblc_, d3dbld_, d3dble_, d3dblf_, d3dblg_, d3dblh_
      automated match to d1nddb_
      complexed with zn
  9. Domain(s) for 3dbr:
    1. 1892713Domain d3dbri_: 3dbr I: [239206]
      Other proteins in same PDB: d3dbra_, d3dbrb_, d3dbrc_, d3dbrd_, d3dbre_, d3dbrf_, d3dbrg_, d3dbrh_
      automated match to d3dbhj_
      complexed with zn
    2. 1892714Domain d3dbrj_: 3dbr J: [239207]
      Other proteins in same PDB: d3dbra_, d3dbrb_, d3dbrc_, d3dbrd_, d3dbre_, d3dbrf_, d3dbrg_, d3dbrh_
      automated match to d3dbhj_
      complexed with zn
    3. 1892715Domain d3dbrk_: 3dbr K: [239208]
      Other proteins in same PDB: d3dbra_, d3dbrb_, d3dbrc_, d3dbrd_, d3dbre_, d3dbrf_, d3dbrg_, d3dbrh_
      automated match to d3dbhj_
      complexed with zn
    4. 1892716Domain d3dbrl_: 3dbr L: [239209]
      Other proteins in same PDB: d3dbra_, d3dbrb_, d3dbrc_, d3dbrd_, d3dbre_, d3dbrf_, d3dbrg_, d3dbrh_
      automated match to d3dbhj_
      complexed with zn
  10. Domain(s) for 3dqv:
    1. 1892717Domain d3dqva_: 3dqv A: [157827]
      Other proteins in same PDB: d3dqvr_, d3dqvy_
      automated match to d3dbhi_
      complexed with zn
    2. 1892718Domain d3dqvb_: 3dqv B: [239217]
      Other proteins in same PDB: d3dqvr_, d3dqvy_
      automated match to d3dbhi_
      complexed with zn
  11. Domain(s) for 3gzn:
    1. 1892707Domain d3gzni_: 3gzn I: [246400]
      Other proteins in same PDB: d3gzna_, d3gznb_, d3gznc_, d3gznd_
      automated match to d2bkrb_
      complexed with b39, zn
    2. 1892708Domain d3gznj_: 3gzn J: [246401]
      Other proteins in same PDB: d3gzna_, d3gznb_, d3gznc_, d3gznd_
      automated match to d2bkrb_
      complexed with b39, zn
  12. Domain(s) for 4f8c:
    1. 1892693Domain d4f8cb_: 4f8c B: [221082]
      automated match to d2gbrc_
      complexed with edo
    2. 1892694Domain d4f8cd_: 4f8c D: [221083]
      automated match to d2gbrc_
      complexed with edo
  13. Domain(s) for 4fbj:
  14. Domain(s) for 4hcp:
  15. Domain(s) for 4p5o:
    1. 1892719Domain d4p5oh_: 4p5o H: [258096]
      Other proteins in same PDB: d4p5oa1, d4p5oa2, d4p5ob_, d4p5oc1, d4p5oc2, d4p5od_, d4p5og_, d4p5oi_
      automated match to d3dbhi_
      complexed with zn
    2. 1892720Domain d4p5ok_: 4p5o K: [263440]
      Other proteins in same PDB: d4p5oa1, d4p5oa2, d4p5ob_, d4p5oc1, d4p5oc2, d4p5od_, d4p5og_, d4p5oi_
      automated match to d3dbhi_
      complexed with zn

More info for Species Human (Homo sapiens) [TaxId:9606] from d.15.1.1 Nedd8

Timeline for Species Human (Homo sapiens) [TaxId:9606] from d.15.1.1 Nedd8: